Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of gene expression by genetic imprinting

Term: GO:0006349  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene63155 SustainPine v3.0 202
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RVR7_PHYPA 7.0e-15
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene64107 SustainPine v3.0 209
• AutoFact: Os02g0494700 protein n=2 Tax=Oryza sativa RepID=Q0E138_ORYSJ 5.0e-21
• FL-Next: sp=Transcriptional activator DEMETER; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Repressor of silencing 1 2.159e-08
Internal
sp_v3.0_unigene65115 SustainPine v3.0 227
• AutoFact: Isoform 2 of Transcriptional activator DEMETER n=1 Tax=Arabidopsis thaliana RepID=Q8LK56-2 6.0e-14
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 6.042e-09
Internal
sp_v3.0_unigene66806 SustainPine v3.0 393
• AutoFact: Retinoblastoma-related protein n=3 Tax=Hordeum vulgare subsp. vulgare RepID=D1M894_HORVD 0.0
• FL-Next: sp=Retinoblastoma-related protein 2; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retinoblastoma-related protein 1 1.756e-19
Internal
sp_v3.0_unigene67302 SustainPine v3.0 190
• AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 5.0e-21
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.725e-08
Internal
sp_v3.0_unigene68444 SustainPine v3.0 204
• AutoFact: DNA (cytosine-5)-methyltransferase 1B n=9 Tax=Poaceae RepID=DNM1B_ORYSJ 9.0e-16
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
C-terminus
sp_v3.0_unigene71925 SustainPine v3.0 158
• AutoFact: Enhancer of zeste, ezh, putative n=1 Tax=Ricinus communis RepID=B9RNE0_RICCO 1.0e-16
• FL-Next: sp=Histone-lysine N-methyltransferase EZ1; Zea mays (Maize). 0.0
• Sma3: Enhancer of zeste, ezh, putative 1.062e-08
Internal
sp_v3.0_unigene73199 SustainPine v3.0 233
• AutoFact: DNA (cytosine-5)-methyltransferase 1B n=9 Tax=Poaceae RepID=DNM1B_ORYSJ 2.0e-13
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Putative C-terminus
sp_v3.0_unigene75989 SustainPine v3.0 204
• AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 1.142e-09
N-terminus
sp_v3.0_unigene76169 SustainPine v3.0 213
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Ricinus communis RepID=B9SPD5_RICCO 1.0e-15
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene77193 SustainPine v3.0 153
• AutoFact: Unassigned protein
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.284e-08
Internal
sp_v3.0_unigene79564 SustainPine v3.0 330
• AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene81408 SustainPine v3.0 205
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RVR7_PHYPA 1.0e-20
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene94189 SustainPine v3.0 368
• AutoFact: MSI type nucleosome/chromatin assembly factor C, putative n=2 Tax=Oryza sativa Japonica Group RepID=Q6ASS7_ORYSJ 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene96480 SustainPine v3.0 289
• AutoFact: DNA (cytosine-5)-methyltransferase 1A n=6 Tax=Poaceae RepID=DNM1A_ORYSJ 2.0e-36
• FL-Next: Isoform 2 of DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica GN=MET1A 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
C-terminus
sp_v3.0_unigene97781 SustainPine v3.0 220
• AutoFact: Cytosine-specific methyltransferase n=6 Tax=Nicotiana RepID=A0A9R7_TOBAC 5.0e-26
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene98769 SustainPine v3.0 634
• AutoFact: Enhancer of zeste, ezh, putative n=1 Tax=Ricinus communis RepID=B9RNE0_RICCO 5.0e-37
• FL-Next: sp=Histone-lysine N-methyltransferase EZA1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 1.534e-11
Internal
sp_v3.0_unigene103111 SustainPine v3.0 513
• AutoFact: Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH 3.0e-27
• FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.103e-08
Internal
sp_v3.0_unigene103229 SustainPine v3.0 527
• AutoFact: Retinoblastoma-related protein n=1 Tax=Ricinus communis RepID=RBR_RICCO 0.0
• FL-Next: sp=Retinoblastoma-related protein; Ricinus communis (Castor bean). 0.0
• Sma3: Retinoblastoma-related protein 1 5.199e-19
Internal
sp_v3.0_unigene103573 SustainPine v3.0 749
• AutoFact: HhH-GPD domain containing protein 6.0e-16
• FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA glycosylase 2.265e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain