Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of gene expression by genetic imprinting

Term: GO:0006349  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35261 SustainPine v3.0 562
• AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene36998 SustainPine v3.0 3863
• AutoFact: Retinoblastoma-related protein n=1 Tax=Cocos nucifera RepID=RBR_COCNU 0.0
• FL-Next: sp=Retinoblastoma-related protein; Cocos nucifera (Coconut palm). 0.0
• Sma3: Retinoblastoma-related protein 1 5.524e-19
Complete
sp_v3.0_unigene38808 SustainPine v3.0 787
• AutoFact: Enhancer of zeste, ezh, putative n=1 Tax=Ricinus communis RepID=B9RNE0_RICCO 0.0
• FL-Next: sp=Histone-lysine N-methyltransferase EZA1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 2.402e-11
Internal
sp_v3.0_unigene41826 SustainPine v3.0 296
• AutoFact: Retinoblastoma-related protein n=1 Tax=Ricinus communis RepID=RBR_RICCO 3.0e-33
• FL-Next: sp=Retinoblastoma-related protein; Ricinus communis (Castor bean). 0.0
• Sma3: Retinoblastoma-related protein 1 4.049e-19
Internal
sp_v3.0_unigene43053 SustainPine v3.0 308
• AutoFact: Retinoblastoma-related protein 1 n=2 Tax=Oryza sativa RepID=RBR1_ORYSJ 4.0e-36
• FL-Next: sp=Retinoblastoma-related protein 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retinoblastoma-related protein 1 5.199e-19
Internal
sp_v3.0_unigene43396 SustainPine v3.0 147
• AutoFact: Retinoblastoma-related protein 1 n=1 Tax=Triticum aestivum RepID=RBR1_WHEAT 5.0e-18
• FL-Next: sp=Retinoblastoma-related protein 1; Triticum aestivum (Wheat). 0.0
• Sma3: Retinoblastoma-related protein 1 5.199e-19
Internal
sp_v3.0_unigene43427 SustainPine v3.0 128
• AutoFact: Protein ROS1, putative n=1 Tax=Ricinus communis RepID=B9SRG6_RICCO 7.0e-15
• FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 2.116e-08
Internal
sp_v3.0_unigene44054 SustainPine v3.0 747
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Ricinus communis RepID=B9RWB0_RICCO 0.0
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene45623 SustainPine v3.0 339
• AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 6.99949e-42
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.526e-08
Internal
sp_v3.0_unigene48078 SustainPine v3.0 402
• AutoFact: Repressor of silencing 3 n=1 Tax=Nicotiana tabacum RepID=A4PF91_TOBAC 1.0e-22
• FL-Next: Isoform 1 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.408e-08
Internal
sp_v3.0_unigene48330 SustainPine v3.0 517
• AutoFact: enhancer of zeste-like 1 [Zea mays] 8.0e-30
• FL-Next: sp=Histone-lysine N-methyltransferase EZ1; Zea mays (Maize). 0.0
• Sma3: SET domain protein 2.878e-11
Internal
sp_v3.0_unigene51229 SustainPine v3.0 260
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 5.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-40 repeat-containing protein MSI1 4.959e-09
Internal
sp_v3.0_unigene52012 SustainPine v3.0 212
• AutoFact: Repressor of silencing 1 n=1 Tax=Nicotiana tabacum RepID=A4PF88_TOBAC 8.0e-30
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.712e-08
Internal
sp_v3.0_unigene52446 SustainPine v3.0 273
• AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
C-terminus
sp_v3.0_unigene52679 SustainPine v3.0 200
• AutoFact: Retinoblastoma-related protein 1 n=1 Tax=Nicotiana tabacum RepID=RBR1_TOBAC 4.0e-13
• FL-Next: sp=Retinoblastoma-related protein 1; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Retinoblastoma-related protein 1 1.091e-19
Internal
sp_v3.0_unigene52869 SustainPine v3.0 322
• AutoFact: MSI type nucleosome/chromatin assembly factor C (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00YD9_OSTTA 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nucleosome/chromatin assembly factor group 2.08e-09
Putative C-terminus
sp_v3.0_unigene53128 SustainPine v3.0 280
• AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9I9I5_POPTR 1.99965e-42
• FL-Next: sp=Histone-lysine N-methyltransferase EZA1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SET domain protein 5.267e-11
Internal
sp_v3.0_unigene54569 SustainPine v3.0 223
• AutoFact: Cytosine-specific methyltransferase n=6 Tax=Nicotiana RepID=A0A9R7_TOBAC 2.0e-09
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 1.664e-18
Internal
sp_v3.0_unigene62295 SustainPine v3.0 175
• AutoFact: fertilization independent endosperm development protein [Catalpa speciosa] 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fertilization-independent endosperm protein 3.659e-15
Internal
sp_v3.0_unigene62709 SustainPine v3.0 166
• AutoFact: Probable histone-binding protein Caf1 n=24 Tax=Coelomata RepID=CAF1_DROME 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain