Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: thylakoid membrane organization

Term: GO:0010027  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene109445 SustainPine v3.0 428
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.29e-13
Internal
sp_v3.0_unigene110436 SustainPine v3.0 216
AutoFact: Cycloartenol synthase n=2 Tax=Pinaceae RepID=Q9FQM1_ABIMA 5.0e-24
FL-Next: tr=Cycloartenol synthase; Abies magnifica (Red fir). 0.0
Sma3: Cycloartenol synthase 0.0
Internal
sp_v3.0_unigene112298 SustainPine v3.0 608
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide, putative, expressed 2.078e-08
Internal
sp_v3.0_unigene115495 SustainPine v3.0 572
AutoFact: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic n=6 Tax=Poaceae RepID=FTSH2_ORYSJ 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative zinc dependent protease 2.532e-08
Putative N-terminus
sp_v3.0_unigene115897 SustainPine v3.0 243
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 2.048e-09
Internal
sp_v3.0_unigene116458 SustainPine v3.0 377
AutoFact: pfam01535, PPR, PPR repeat 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene116769 SustainPine v3.0 264
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q2HUK9_MEDTR 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.136e-06
Internal
sp_v3.0_unigene120694 SustainPine v3.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricopeptide-like helical 4.444e-12
Internal
sp_v3.0_unigene121659 SustainPine v3.0 257
AutoFact: Putative zinc dependent protease n=1 Tax=Trifolium pratense RepID=Q2PEX6_TRIPR 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative zinc dependent protease 2.594e-08
Internal
sp_v3.0_unigene122583 SustainPine v3.0 401
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.637e-15
N-terminus
sp_v3.0_unigene129596 SustainPine v3.0 348
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 7.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 3.217e-11
C-terminus
sp_v3.0_unigene129643 SustainPine v3.0 378
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor gb|AEE79654.1| pentatricopeptide repeat-containing protein [Ara 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 6.154e-10
C-terminus
sp_v3.0_unigene130812 SustainPine v3.0 232
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene132780 SustainPine v3.0 384
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 6.474e-11
Internal
sp_v3.0_unigene135655 SustainPine v3.0 480
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40410, mitochondrial; Flags: Precursor dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.154e-10
Internal
sp_v3.0_unigene139072 SustainPine v3.0 379
AutoFact: peroxisome biogenesis protein PEX1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 9.593e-11
Internal
sp_v3.0_unigene140827 SustainPine v3.0 635
AutoFact: RecName: Full=Ferredoxin--NADP reductase, chloroplastic; Short=FNR; Flags: Precursor gb|AAA33029.1| ferredoxin-NADP+ reductase precursor [Mesembryanthemum crystallinum] prf||1604475A ferredoxin NADP reductase 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ferredoxin--NADP reductase 2.331e-27
C-terminus
sp_v3.0_unigene143658 SustainPine v3.0 430
AutoFact: 26S protease regulatory subunit 6B homolog n=13 Tax=Embryophyta RepID=PRS6B_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasomal ATPase 1.574e-13
Putative N-terminus
sp_v3.0_unigene146391 SustainPine v3.0 1029
AutoFact: phospholipase A1-Igamma1 [Arabidopsis thaliana] sp|Q941F1.2|PLA15_ARATH RecName: Full=Phospholipase A1-Igamma1, chloroplastic; Flags: Precursor gb|AAF63138.1|AC011001_8 Similar to lipases [Arabidopsis thaliana] gb|AAM20450.1| lipase, putative [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Triacylglycerol lipase, putative 4.162e-15
C-terminus
sp_v3.0_unigene148114 SustainPine v3.0 185
AutoFact: Protein THYLAKOID FORMATION1, chloroplastic n=3 Tax=Oryza sativa RepID=THF1_ORYSJ 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein THYLAKOID FORMATION1, chloroplastic 2.032e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain