Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: xylem development

Term: GO:0010089  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene153507 SustainPine v3.0 399
AutoFact: Eukaryotic translation initiation factor 5A n=1 Tax=Dianthus caryophyllus RepID=IF5A_DIACA 7.0e-39
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.397e-28
N-terminus
sp_v3.0_unigene154791 SustainPine v3.0 247
AutoFact: Eukaryotic translation initiation factor 5A-1 n=20 Tax=Saccharomycetaceae RepID=IF5A1_YEAST 1.0e-21
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: eIF-5A-2 4.017e-16
Putative C-terminus
sp_v3.0_unigene154878 SustainPine v3.0 447
AutoFact: Translation initiation factor 5A n=1 Tax=Glossina morsitans morsitans RepID=D3TMH0_GLOMM 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 4.491e-28
N-terminus
sp_v3.0_unigene154949 SustainPine v3.0 425
AutoFact: Eukaryotic translation initiation factor eIF-5A n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D4L5_NEOFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.811e-28
N-terminus
sp_v3.0_unigene155336 SustainPine v3.0 439
AutoFact: Translation initiation factor eIF-5A family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23BQ5_TETTH 5.99756e-43
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 7.476e-28
N-terminus
sp_v3.0_unigene156214 SustainPine v3.0 495
AutoFact: Initiation factor 5a n=1 Tax=Flammulina velutipes RepID=D2JY86_FLAVE 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 5.911e-28
N-terminus
sp_v3.0_unigene158316 SustainPine v3.0 117
AutoFact: eIF5A n=2 Tax=Percomorpha RepID=C5HBN1_PAROL 7.0e-13
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 1.956e-28
Internal
sp_v3.0_unigene158595 SustainPine v3.0 427
AutoFact: Eukaryotic translation initiation factor 5A-1 n=3 Tax=Onygenales RepID=C4JVG1_UNCRE 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.601e-28
N-terminus
sp_v3.0_unigene158641 SustainPine v3.0 437
AutoFact: RecName: Full=Eukaryotic translation initiation factor 5A-2; Short=eIF-5A-2; AltName: Full=eIF-4D emb|CAA45104.1| eukaryotic initiation factor 5A (2) [Nicotiana plumbaginifolia] 1.0e-23
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 1.605e-24
C-terminus
sp_v3.0_unigene159133 SustainPine v3.0 384
AutoFact: Eukaryotic translation initiation factor eIF-5A n=2 Tax=Metarhizium RepID=E9EFI4_METAQ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Eukaryotic translation initiation factor 5A 5.911e-28
N-terminus
sp_v3.0_unigene161436 SustainPine v3.0 480
AutoFact: Probable HYP2-translation initiation factor eIF5A.1 n=2 Tax=Ustilaginaceae RepID=E6ZVD8_9BASI 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 6.811e-28
Putative Complete
sp_v3.0_unigene162631 SustainPine v3.0 336
AutoFact: LOB domain-containing protein 29 [Arabidopsis thaliana] sp|Q9M2J7.1|LBD29_ARATH RecName: Full=LOB domain-containing protein 29; AltName: Full=ASYMMETRIC LEAVES 2-like protein 16; Short=AS2-like protein 16 gb|AAL38038.1|AF447893_1 LOB DOMAIN 29 [Arabidopsi 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 1.487e-35
Putative N-terminus
sp_v3.0_unigene164401 SustainPine v3.0 177
AutoFact: NAC secondary wall thickening promoting factor 1 n=1 Tax=Medicago truncatula RepID=D8WJD8_MEDTR 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene165638 SustainPine v3.0 274
AutoFact: Eukaryotic translation initiation factor 5A-2 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NJF7_COPC7 4.0e-28
FL-Next: tr=Eukaryotic translation initiation factor 5A 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 4.36e-18
C-terminus
sp_v3.0_unigene167331 SustainPine v3.0 339
AutoFact: LOB domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RDE1_RICCO 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 4.464e-31
Internal
sp_v3.0_unigene167550 SustainPine v3.0 341
AutoFact: DUF260 domain containing protein 5.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LOB domain-containing protein, putative 3.09967e-42
N-terminus
sp_v3.0_unigene189938 SustainPine v3.0 252
AutoFact: GH15450 n=1 Tax=Drosophila grimshawi RepID=B4J2E2_DROGR 2.0e-21
FL-Next: tr=Eukaryotic translation initiation factor 5A 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: eIF-5A-2 7.147e-16
Putative C-terminus
sp_v3.0_unigene201378 SustainPine v3.0 562
AutoFact: Translation initiation factor eIF-5A, promotes formation of the first peptide bond n=2 Tax=Pichia pastoris RepID=C4R6C4_PICPG 0.0
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 5.371e-28
Complete
sp_v3.0_unigene201873 SustainPine v3.0 504
AutoFact: Translation initiation factor eIF-5A family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23BQ5_TETTH 1.0e-36
FL-Next: tr=Eukaryotic translation initiation factor 5A; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Eukaryotic translation initiation factor 5A 5.818e-28
Putative Complete
sp_v3.0_unigene202053 SustainPine v3.0 1001
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain