Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: transcription factor complex

Term: GO:0005667  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene70402 SustainPine v3.0 338
AutoFact: Transcription factor Dp-1 n=3 Tax=Andropogoneae RepID=B6UDG0_MAIZE 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor Dp-1 1.526e-08
Internal
sp_v3.0_unigene73556 SustainPine v3.0 113
AutoFact: transcription factor [Nicotiana tabacum] 3.0e-06
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 1.559e-11
Internal
sp_v3.0_unigene80875 SustainPine v3.0 164
AutoFact: transcription factor [Nicotiana tabacum] 2.0e-10
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 1.126e-17
Internal
sp_v3.0_unigene103574 SustainPine v3.0 674
AutoFact: casein kinase [Beta vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative casein kinase I 7.298e-25
N-terminus
sp_v3.0_unigene105749 SustainPine v3.0 381
AutoFact: Transcription factor IIB n=3 Tax=Solanoideae RepID=B9VXZ5_CAPAN 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Capsicum frutescens (Cayenne pepper) (Tabasco pepper). 0.0
Sma3: TFIIB-related protein 6.635e-09
Internal
sp_v3.0_unigene108607 SustainPine v3.0 193
AutoFact: E2F transcription factor-like E2FE n=3 Tax=Arabidopsis RepID=E2FE_ARATH 3.0e-12
FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
Internal
sp_v3.0_unigene110045 SustainPine v3.0 292
AutoFact: TFIIB-related protein (Fragment) n=2 Tax=Andropogoneae RepID=Q93WQ2_MAIZE 1.0e-36
FL-Next: tr=TFIIB-related protein, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: TFIIB-related protein 3.176e-13
Putative N-terminus
sp_v3.0_unigene110631 SustainPine v3.0 211
AutoFact: transcription factor IIB (ISS) [Ostreococcus tauri] emb|CAL56498.1| transcription factor IIB (ISS) [Ostreococcus tauri] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene127679 SustainPine v3.0 781
AutoFact: RecName: Full=Transcription initiation factor IIB; AltName: Full=General transcription factor TFIIB gb|AAB09756.1| transcription factor TFIIB [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor iib, putative 6.241e-12
C-terminus
sp_v3.0_unigene127932 SustainPine v3.0 1147
AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription initiation factor iib, putative 1.301e-11
C-terminus
sp_v3.0_unigene129006 SustainPine v3.0 444
AutoFact: transcription initiation factor TFIID subunit D11 [Arabidopsis thaliana] gb|AAQ65105.1| At1g02680 [Arabidopsis thaliana] gb|AAR28017.1| TAF13 [Arabidopsis thaliana] dbj|BAD43669.1| putative transcription factor TFIID [Arabidopsis thaliana] dbj|BAD43729.1| 2.0e-05
FL-Next: tr=Transcription initiation factor TFIID subunit; Jatropha curcas. 0.0
N-terminus
sp_v3.0_unigene139691 SustainPine v3.0 238
AutoFact: Transcription factor DP [Arabidopsis thaliana] sp|Q9FNY2.1|DPB_ARATH RecName: Full=Transcription factor-like protein DPB; AltName: Full=DP-like protein B; Short=AtDPbB; AltName: Full=E2F dimerization partner protein B emb|CAC15484.1| DP-like protein [Arab 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor Dp-1 1.042e-08
Internal
sp_v3.0_unigene148762 SustainPine v3.0 135
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 7.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription factor DP, E2 dimerization partner protein 1.408e-08
Internal
sp_v3.0_unigene154280 SustainPine v3.0 537
AutoFact: Transcription initiation factor TFIID subunit 13 n=2 Tax=Dictyostelium RepID=TAF13_DICDI 8.0e-28
FL-Next: tr=Transcription initiation factor IID 18 kDa subunit (TAFII-18) family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Complete
sp_v3.0_unigene189093 SustainPine v3.0 951
AutoFact: rve domain containing protein 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene190535 SustainPine v3.0 388
AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 8.0e-24
FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
Complete
sp_v3.0_unigene199853 SustainPine v3.0 445
AutoFact: Transcription factor, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MTK5_PHYIT 2.0e-30
FL-Next: tr=E2F-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Transcription factor E2F 1.233e-29
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain