Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: double-strand break repair via homologous recombination

Term: GO:0000724  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene104254 SustainPine v3.0 954
AutoFact: putative DNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA Helicase 2.996e-17
Putative C-terminus
sp_v3.0_unigene104491 SustainPine v3.0 491
AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SNF2 family DNA-dependent ATPase 3.928e-26
Internal
sp_v3.0_unigene104803 SustainPine v3.0 486
AutoFact: Isoform 2 of DNA repair protein XRCC2 homolog n=1 Tax=Arabidopsis thaliana RepID=Q682D3-2 1.0e-26
FL-Next: Isoform 2 of DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana GN=XRCC2 0.0
N-terminus
sp_v3.0_unigene105565 SustainPine v3.0 480
AutoFact: OsRad54 protein n=1 Tax=Oryza sativa Japonica Group RepID=A4PBL4_ORYSJ 0.0
FL-Next: sp=DNA repair and recombination protein RAD54; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SNF2 super family 4.243e-06
Internal
sp_v3.0_unigene116733 SustainPine v3.0 367
AutoFact: RecA bacterial DNA recombination protein [Medicago truncatula] 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene118295 SustainPine v3.0 270
AutoFact: DNA Helicase [Arabidopsis thaliana] 2.0e-23
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA Helicase 5.61e-08
Internal
sp_v3.0_unigene120981 SustainPine v3.0 369
AutoFact: DNA Helicase [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA helicase isolog 1.083e-08
Internal
sp_v3.0_unigene130626 SustainPine v3.0 487
AutoFact: putative nucleotide repair protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149923 SustainPine v3.0 115
AutoFact: DNA excision repair protein ERCC-1 [Arabidopsis thaliana] sp|Q9MA98.1|ERCC1_ARATH RecName: Full=DNA excision repair protein ERCC-1; Short=AtERCC1; Short=AtRAD10; AltName: Full=Ultraviolet hypersensitive 7 gb|AAF27027.1|AC009177_17 putative nucleotide repa 5.0e-09
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163774 SustainPine v3.0 385
AutoFact: DNA repair protein RAD54-like [Arabidopsis thaliana] 1.0e-35
FL-Next: sp=DNA repair and recombination protein RAD54; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SNF2 super family 3.446e-06
Internal
sp_v3.0_unigene189345 SustainPine v3.0 726
AutoFact: Chromatin assembly factor 1, subunit A, putative n=1 Tax=Ricinus communis RepID=B9RM13_RICCO 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene194960 SustainPine v3.0 516
AutoFact: DNA repair protein RAD51-like 3 [Arabidopsis thaliana] sp|Q8GXF0.2|RA51C_ARATH RecName: Full=DNA repair protein RAD51 homolog 3; AltName: Full=DNA repair-recombination protein RAD51C; Short=AtRAD51C emb|CAC14294.1| Rad51C protein [Arabidopsis thaliana] db 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rad51 DNA recombinase 3 4.556e-09
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain