Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent DNA helicase activity

Term: GO:0004003  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene657 SustainPine v3.0 3163
AutoFact: probable ATP-dependent RNA helicase DDX11 [Danio rerio] gb|AAH85645.1| Zgc:92172 [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene714 SustainPine v3.0 4128
AutoFact: putative ATP-dependent DNA helicase RECG [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6372 SustainPine v3.0 2622
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ku70-like protein 4.296e-09
Complete
sp_v3.0_unigene6406 SustainPine v3.0 3309
AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene13028 SustainPine v3.0 934
AutoFact: Ku P80 DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RDD3_RICCO 8.0e-39
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
C-terminus
sp_v3.0_unigene13337 SustainPine v3.0 734
AutoFact: nucleotide excision repair protein XP-D homolog [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA repair helicase UVH6 8.71e-09
C-terminus
sp_v3.0_unigene14757 SustainPine v3.0 560
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene15170 SustainPine v3.0 579
AutoFact: UvrD/REP helicase family protein [Trichomonas vaginalis G3] gb|EAY01482.1| UvrD/REP helicase family protein [Trichomonas vaginalis G3] 9.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene15329 SustainPine v3.0 1055
AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 2.0e-22
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 5.087e-09
C-terminus
sp_v3.0_unigene15435 SustainPine v3.0 870
AutoFact: UvrD/REP helicase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B0L3_HERA2 4.0e-26
FL-Next: tr=ATP-dependent DNA helicase; Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). 0.0
N-terminus
sp_v3.0_unigene41852 SustainPine v3.0 264
AutoFact: DNA replication ATP-dependent helicase Dna2 n=3 Tax=Arabidopsis thaliana RepID=F4HXR6_ARATH 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene42137 SustainPine v3.0 161
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 4.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene42160 SustainPine v3.0 407
AutoFact: UvrD/REP helicase n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8GBH8_CHLAD 3.0e-24
FL-Next: tr=ATP-dependent DNA helicase; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene44665 SustainPine v3.0 469
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 6.02558e-44
FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48207 SustainPine v3.0 479
AutoFact: DNA replication ATP-dependent helicase Dna2 n=3 Tax=Arabidopsis thaliana RepID=F4HXR6_ARATH 7.0e-23
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene48661 SustainPine v3.0 217
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene51920 SustainPine v3.0 401
AutoFact: Helicase n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BW99_9EUKA 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene51997 SustainPine v3.0 344
AutoFact: DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] gb|AEE28356.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene55201 SustainPine v3.0 316
AutoFact: DNA replication helicase n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XML5_GROCL 1.0e-20
FL-Next: tr=DNA replication helicase dna2, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene58195 SustainPine v3.0 409
AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain