Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ATP-dependent DNA helicase activity

Term: GO:0004003  Help

Source: GO from Sma3

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene58507 SustainPine v3.0 94
• AutoFact: DNA repair and transcription factor XPB1 [Arabidopsis thaliana] 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58845 SustainPine v3.0 184
• AutoFact: Fanconi anemia group J protein homolog [Gallus gallus] sp|Q3YK19.1|FANCJ_CHICK RecName: Full=Fanconi anemia group J protein homolog; Short=Protein FACJ; AltName: Full=ATP-dependent RNA helicase BRIP1 gb|AAZ66861.1| BRIP1 [Gallus gallus] 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene60278 SustainPine v3.0 350
• AutoFact: putative BRCA1 interacting protein C-terminal helicase 1 [Oryza sativa Japonica Group] 5.0e-20
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene61429 SustainPine v3.0 179
• AutoFact: DNA repair and transcription factor XPB1 [Arabidopsis thaliana] 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62996 SustainPine v3.0 198
• AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 8.0e-17
• FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: KAP-2 2.848e-13
Internal
sp_v3.0_unigene64263 SustainPine v3.0 179
• AutoFact: Rad25/xp-B DNA repair helicase, putative n=2 Tax=rosids RepID=B9RCF1_RICCO 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene68487 SustainPine v3.0 123
• AutoFact: DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] gb|AEE28356.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] 5.0e-06
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene71009 SustainPine v3.0 386
• AutoFact: DNA replication helicase dna2, putative n=1 Tax=Ricinus communis RepID=B9SKI5_RICCO 3.0e-17
• FL-Next: tr=Putative uncharacterized protein Sb06g026800; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Internal
sp_v3.0_unigene77832 SustainPine v3.0 396
• AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 3.0e-38
• FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: KAP-2 5.455e-09
N-terminus
sp_v3.0_unigene77980 SustainPine v3.0 198
• AutoFact: Strong similarity to gb|U04968 nucleotide excision repair protein (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana] 9.0e-18
• FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA repair helicase UVH6 7.91e-09
Internal
sp_v3.0_unigene78454 SustainPine v3.0 174
• AutoFact: KAP-2 n=1 Tax=Medicago truncatula RepID=Q8S563_MEDTR 4.0e-17
• FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: KAP-2 3.602e-13
Internal
sp_v3.0_unigene81419 SustainPine v3.0 172
• AutoFact: ku P80 DNA helicase, putative; K10885 ATP-dependent DNA helicase 2 subunit 2 4.0e-11
• FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: KAP-2 3.246e-09
Internal
sp_v3.0_unigene99233 SustainPine v3.0 711
• AutoFact: Unassigned protein
• FL-Next: tr=ATP-dependent DNA helicase pcrA; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
C-terminus
sp_v3.0_unigene102787 SustainPine v3.0 435
• AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 7.0e-31
• FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: KAP-2 6.229e-09
Internal
sp_v3.0_unigene102846 SustainPine v3.0 625
• AutoFact: Strong similarity to gb|U04968 nucleotide excision repair protein (ERCC2) from Cricetulus grisseus [Arabidopsis thaliana] 0.0
• FL-Next: sp=DNA repair helicase UVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA repair helicase UVH6 7.067e-09
N-terminus
sp_v3.0_unigene105780 SustainPine v3.0 521
• AutoFact: regulator of telomere elongation helicase 1 [Arabidopsis thaliana] gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana] 3.0e-28
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene106505 SustainPine v3.0 366
• AutoFact: Unassigned protein
• FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: KAP-2 3.108e-13
Internal
sp_v3.0_unigene106948 SustainPine v3.0 410
• AutoFact: DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] gb|AEE28356.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana] 4.0e-28
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene107150 SustainPine v3.0 243
• AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 1.0e-22
• FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: KAP-2 2.427e-13
Internal
sp_v3.0_unigene107272 SustainPine v3.0 255
• AutoFact: ATP-dependent DNA helicase 2 subunit KU80 n=1 Tax=Oryza sativa Japonica Group RepID=KU80_ORYSJ 9.0e-08
• FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: KAP-2 1.902e-13
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain