Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast inner membrane

Term: GO:0009706  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10416 SustainPine v3.0 3844
AutoFact: Putativepod-specific dehydrogenase SAC25 n=5 Tax=Arabidopsis RepID=Q8LCE7_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Short-chain dehydrogenase, putative 3.848e-18
Misassembled
sp_v3.0_unigene10702 SustainPine v3.0 598
AutoFact: Calcium ATPase n=2 Tax=Nicotiana benthamiana RepID=D5JXY5_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 1.534e-40
Internal
sp_v3.0_unigene11409 SustainPine v3.0 1809
AutoFact: DUF3411 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene12839 SustainPine v3.0 932
AutoFact: Autoinhibited calcium ATPase n=1 Tax=Populus trichocarpa RepID=B9H9I2_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 3.045e-38
Internal
sp_v3.0_unigene13638 SustainPine v3.0 497
AutoFact: Magnesium chelatase H subunit n=6 Tax=core eudicotyledons RepID=D5KXY0_VITVI 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.622e-09
Internal
sp_v3.0_unigene13769 SustainPine v3.0 2254
AutoFact: mitochondrial protoporphyrinogen oxidase [Amaranthus hypochondriacus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protoporphyrinogen IX oxidase 1.059e-11
Complete
sp_v3.0_unigene15974 SustainPine v3.0 2560
AutoFact: Autoinhibited calcium ATPase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IN45_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Autoinhibited calcium ATPase 1.70958e-43
N-terminus
sp_v3.0_unigene16791 SustainPine v3.0 1280
AutoFact: translocon at inner membrane of chloroplasts 21 [Arabidopsis thaliana] gb|AAD26904.1| expressed protein [Arabidopsis thaliana] gb|AAL09751.1| At2g15290/F27O10.6 [Arabidopsis thaliana] gb|AAL38691.1| unknown protein [Arabidopsis thaliana] gb|AAM67464.1| un 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene17941 SustainPine v3.0 1443
AutoFact: DUF3411 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18485 SustainPine v3.0 801
AutoFact: Short-chain dehydrogenase/reductase family protein n=2 Tax=Arabidopsis RepID=D7LJU7_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Short-chain dehydrogenase, putative 5.916e-16
C-terminus
sp_v3.0_unigene23207 SustainPine v3.0 3890
AutoFact: PREDICTED: similar to ACA1 (autoinhibited Ca2+ -ATPase 1); calmodulin binding isoform 1 n=1 Tax=Vitis vinifera RepID=UPI00015C9686 0.0
FL-Next: sp=Calcium-transporting ATPase 1, plasma membrane-type; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Autoinhibited calcium ATPase 4.23e-40
Complete
sp_v3.0_unigene23888 SustainPine v3.0 1560
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL27501.1|AF439829_1 AT4g24050/T19F6_40 [Arabidopsis thaliana] gb|AAB63619.1| ribitol dehydrogenase isolog [Arabidopsis thaliana] emb|CAB51648.1| putative protein [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Short-chain dehydrogenase, putative 1.881e-18
Complete
sp_v3.0_unigene24691 SustainPine v3.0 1084
AutoFact: HPP n=1 Tax=Zea mays RepID=B6TMS3_MAIZE 2.0e-35
FL-Next: tr=HPP family protein, expressed; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
sp_v3.0_unigene27869 SustainPine v3.0 933
AutoFact: Ca2+-transporting ATPase [Arabidopsis thaliana] sp|O81108.1|ACA2_ARATH RecName: Full=Calcium-transporting ATPase 2, plasma membrane-type; AltName: Full=Ca(2+)-ATPase isoform 2 gb|AAC26997.1| plasma membrane-type calcium ATPase [Arabidopsis thaliana] emb|C 0.0
FL-Next: sp=Calcium-transporting ATPase 2, plasma membrane-type; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cation-transporting atpase plant, putative 6.23e-14
N-terminus
sp_v3.0_unigene29621 SustainPine v3.0 1011
AutoFact: magnesium chelatase subunit [Glycine max] 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.506e-09
N-terminus
sp_v3.0_unigene34213 SustainPine v3.0 1103
AutoFact: HPP integral membrane domain-containing protein [Arabidopsis thaliana] dbj|BAC41883.1| unknown protein [Arabidopsis thaliana] gb|ABN04790.1| At5g62720 [Arabidopsis thaliana] gb|AED97647.1| HPP integral membrane domain-containing protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene37381 SustainPine v3.0 1610
AutoFact: [S] COG2119 Predicted membrane protein 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted membrane protein 5.299e-11
Complete
sp_v3.0_unigene37500 SustainPine v3.0 884
AutoFact: Magnesium chelatase H subunit n=6 Tax=core eudicotyledons RepID=D5KXY0_VITVI 0.0
FL-Next: sp=Magnesium-chelatase subunit ChlH, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Magnesium-chelatase subunit chlH chloroplast 3.335e-09
Internal
sp_v3.0_unigene37550 SustainPine v3.0 518
AutoFact: Autoinhibited calcium ATPase n=1 Tax=Populus trichocarpa RepID=B9IHW7_POPTR 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: P-type ATPase 1.668e-13
C-terminus
sp_v3.0_unigene37587 SustainPine v3.0 920
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Division protein 1.227e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain