Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Dead box ATP-dependent RNA helicase, putative

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene403 SustainPine v3.0 1855
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.649e-12
Putative Complete
sp_v3.0_unigene2391 SustainPine v3.0 2584
• AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 7.893e-21
Complete
sp_v3.0_unigene2763 SustainPine v3.0 2135
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 5.401e-22
C-terminus
sp_v3.0_unigene6704 SustainPine v3.0 2494
• AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.075e-24
C-terminus
sp_v3.0_unigene8279 SustainPine v3.0 2746
• AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.8e-18
Complete
sp_v3.0_unigene12898 SustainPine v3.0 3657
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.935e-21
Complete
sp_v3.0_unigene13030 SustainPine v3.0 2005
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.219e-09
Putative Complete
sp_v3.0_unigene13626 SustainPine v3.0 413
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.663e-20
Internal
sp_v3.0_unigene20538 SustainPine v3.0 633
• AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.261e-09
Putative N-terminus
sp_v3.0_unigene20701 SustainPine v3.0 1632
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana] sp|Q84W89.2|RH37_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 37 gb|AAD23001.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana] gb|AEC10133.1| DEAD-box ATP-dependent RNA h 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.676e-24
C-terminus
sp_v3.0_unigene23914 SustainPine v3.0 2102
• AutoFact: DEAD-box ATP-dependent RNA helicase 5 n=2 Tax=Oryza sativa RepID=RH5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.49e-22
Complete
sp_v3.0_unigene34227 SustainPine v3.0 836
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 45 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.13e-08
Internal
sp_v3.0_unigene35667 SustainPine v3.0 1033
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 2.076e-30
Internal
sp_v3.0_unigene37846 SustainPine v3.0 690
• AutoFact: eukaryotic initiation factor 4A [Pennisetum glaucum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.985e-09
Internal
sp_v3.0_unigene37925 SustainPine v3.0 3299
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SYU7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 0.0
Putative Complete
sp_v3.0_unigene39643 SustainPine v3.0 678
• AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 7.087e-14
Putative N-terminus
sp_v3.0_unigene45238 SustainPine v3.0 197
• AutoFact: Eukaryotic initiation factor 4A-like protein n=2 Tax=Chlamydomonadales RepID=A8IP17_CHLRE 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 7.358e-06
Internal
sp_v3.0_unigene46112 SustainPine v3.0 795
• AutoFact: DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis thaliana] sp|Q9LU46.1|RH35_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 35 dbj|BAA97391.1| DEAD-box protein abstrakt [Arabidopsis thaliana] dbj|BAE98527.1| DEAD-box protein abstrakt [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.135e-19
C-terminus
sp_v3.0_unigene52673 SustainPine v3.0 208
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 35A dbj|BAD38045.1| putative DEAD-box protein abstrakt [Oryza sativa Japonica Group] 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 5.203e-08
Internal
sp_v3.0_unigene58749 SustainPine v3.0 359
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.017e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain