Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: gravitropism

Term: GO:0009630  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10857 SustainPine v3.0 768
• AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene11142 SustainPine v3.0 645
• AutoFact: Auxin efflux carrier n=1 Tax=Solanum lycopersicum RepID=D6RT09_SOLLC 3.0e-22
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 2.8026e-44
Putative C-terminus
sp_v3.0_unigene11430 SustainPine v3.0 828
• AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 5.0e-21
• FL-Next: Isoform 2 of Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 0.0
• Sma3: Auxin response factor 2 1.716e-07
Internal
sp_v3.0_unigene11576 SustainPine v3.0 1444
• AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8RR38_SELML 0.0
• FL-Next: tr=ABC transporter B family member; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Complete
sp_v3.0_unigene11947 SustainPine v3.0 1180
• AutoFact: vesicle transport v-SNARE 11-like [Solanum tuberosum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Qb-SNARE, VTI1-family 2.117e-16
Complete
sp_v3.0_unigene12324 SustainPine v3.0 4347
• AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 6.80891e-42
Complete
sp_v3.0_unigene12369 SustainPine v3.0 672
• AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene12862 SustainPine v3.0 907
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: GRAS family transcription factor 1.401e-23
C-terminus
sp_v3.0_unigene13750 SustainPine v3.0 1692
• AutoFact: CjMDR1 n=1 Tax=Coptis japonica RepID=Q94IH6_COPJA 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
Internal
sp_v3.0_unigene13839 SustainPine v3.0 4600
• AutoFact: MDR-like ABC transporter n=1 Tax=Taxus cuspidata RepID=E6Y0T0_TAXCU 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug resistance protein 1, 2, putative 6.97e-34
Complete
sp_v3.0_unigene13963 SustainPine v3.0 1166
• AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene14502 SustainPine v3.0 2304
• AutoFact: GTP-binding protein alpha subunit, gna, putative n=1 Tax=Ricinus communis RepID=B9S8Q3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GTP-binding protein alpha subunit, gna, putative 2.329e-16
Complete
sp_v3.0_unigene16261 SustainPine v3.0 1473
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene16544 SustainPine v3.0 4359
• AutoFact: ATP-binding cassette transporter, subfamily B, member 18, group MDR/PGP protein PpABCB18 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU14_PHYPA 0.0
• FL-Next: sp=ABC transporter B family member 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 2.66247e-44
Complete
sp_v3.0_unigene16695 SustainPine v3.0 362
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 5.0e-38
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: Protein SCARECROW 5.351e-17
C-terminus
sp_v3.0_unigene17698 SustainPine v3.0 960
• AutoFact: auxin-responsive protein IAA13 [Arabidopsis thaliana] ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana] gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana] gb|AAC49054.1| IAA13 [Arabidopsis thaliana] gb|AA 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aux/IAA protein 1.312e-16
C-terminus
sp_v3.0_unigene17965 SustainPine v3.0 1898
• AutoFact: auxin-responsive protein IAA13 [Arabidopsis thaliana] sp|Q38831.2|IAA13_ARATH RecName: Full=Auxin-responsive protein IAA13; AltName: Full=Indoleacetic acid-induced protein 13 gb|AAO64809.1| At2g33310 [Arabidopsis thaliana] dbj|BAE99393.1| auxin regulated 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aux/IAA protein 3.415e-08
Complete
sp_v3.0_unigene18694 SustainPine v3.0 711
• AutoFact: Auxin efflux facilitator SlPIN1 n=1 Tax=Solanum lycopersicum RepID=E5KGD0_SOLLC 9.99967e-42
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 1.93379e-43
C-terminus
sp_v3.0_unigene20343 SustainPine v3.0 996
• AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9I7G6_POPTR 0.0
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Sma3: Multidrug/pheromone exporter, MDR family, ABC transporter family 0.0
C-terminus
sp_v3.0_unigene20427 SustainPine v3.0 1014
• AutoFact: Auxin-induced protein 2 n=2 Tax=Pinus RepID=Q7XYT5_PINTA 0.0
• FL-Next: tr=Putative auxin induced transcription factor Aux/IAA; Pinus pinaster (Maritime pine). 0.0
• Sma3: Aux/IAA protein 3.592e-16
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain