Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene198514 SustainPine v3.0 457
• AutoFact: 60S ribosomal protein L37a n=7 Tax=leotiomyceta RepID=Q4WZH8_ASPFU 4.99983e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L37a 1.156e-10
Complete
sp_v3.0_unigene198541 SustainPine v3.0 559
• AutoFact: 60s ribosomal protein l11 [Cryptococcus neoformans var. neoformans JEC21] ref|XP_773228.1| hypothetical protein CNBJ0070 [Cryptococcus neoformans var. neoformans B-3501A] ref|XP_003196328.1| 60s ribosomal protein L11 [Cryptococcus gattii WM276] gb|EAL1858 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Putative Complete
sp_v3.0_unigene198650 SustainPine v3.0 523
• AutoFact: Ribosomal protein L37 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WAU5_PYRTR 1.99965e-42
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Complete
sp_v3.0_unigene198702 SustainPine v3.0 449
• AutoFact: 60S ribosomal protein L36 n=2 Tax=Chlamydomonadales RepID=D8U456_VOLCA 2.0e-24
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L36 0.0
Complete
sp_v3.0_unigene198738 SustainPine v3.0 278
• AutoFact: ACYPI006857 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WU26_ACYPI 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 8.216e-39
N-terminus
sp_v3.0_unigene198830 SustainPine v3.0 400
• AutoFact: 60S ribosomal protein L6 n=2 Tax=Phasianidae RepID=Q8UWG7_CHICK 1.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 9.351e-08
N-terminus
sp_v3.0_unigene198912 SustainPine v3.0 470
• AutoFact: Ribosomal protein L19 n=1 Tax=Naegleria gruberi RepID=D2VC39_NAEGR 3.0e-36
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
N-terminus
sp_v3.0_unigene199651 SustainPine v3.0 319
• AutoFact: 60S ribosomal protein L10a-3 n=9 Tax=rosids RepID=R10A3_ARATH 1.0e-21
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 8.052e-33
C-terminus
sp_v3.0_unigene199671 SustainPine v3.0 163
• AutoFact: Ribosomal protein L10 n=4 Tax=Stylonychinae RepID=F5AMN8_STYLE 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 2.378e-10
N-terminus
sp_v3.0_unigene199762 SustainPine v3.0 373
• AutoFact: 60S ribosomal protein L6 n=2 Tax=Neurospora crassa RepID=Q7SH22_NEUCR 3.00004e-41
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene199793 SustainPine v3.0 362
• AutoFact: Ribosomal protein L13 containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q245E7_TETTH 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 8.045e-21
Putative N-terminus
sp_v3.0_unigene199818 SustainPine v3.0 322
• AutoFact: putative QM protein [Lepeophtheirus salmonis] gb|ADD38795.1| 60S ribosomal protein L10 [Lepeophtheirus salmonis] 7.0e-40
• FL-Next: sp=60S ribosomal protein L10; Pinus taeda (Loblolly pine). 0.0
• Sma3: 60S ribosomal protein L10 8.854e-14
N-terminus
sp_v3.0_unigene199920 SustainPine v3.0 307
• AutoFact: PREDICTED: 60S ribosomal protein L7a [Apis mellifera] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.408e-08
Putative C-terminus
sp_v3.0_unigene199967 SustainPine v3.0 527
• AutoFact: Putative 60S ribosomal protein RPL8 (Fragment) n=1 Tax=Phoronis muelleri RepID=B2YI29_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 2.922e-08
N-terminus
sp_v3.0_unigene200145 SustainPine v3.0 465
• AutoFact: Ribosomal protein L7 (Fragment) n=2 Tax=Branchiostoma RepID=Q86LY5_BRALA 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 9.992e-08
N-terminus
sp_v3.0_unigene200167 SustainPine v3.0 298
• AutoFact: Ribosomal protein L8 n=2 Tax=Chlamydomonadales RepID=A8IVK1_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
Putative C-terminus
sp_v3.0_unigene200375 SustainPine v3.0 412
• AutoFact: PREDICTED: similar to ribosomal protein L7e n=1 Tax=Nasonia vitripennis RepID=UPI00015B5B45 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-1 7.092e-08
C-terminus
sp_v3.0_unigene200489 SustainPine v3.0 379
• AutoFact: Ribosomal protein L7-like n=1 Tax=Ixodes scapularis RepID=Q4PM37_IXOSC 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 8.802e-08
Putative N-terminus
sp_v3.0_unigene200506 SustainPine v3.0 425
• AutoFact: Ribosomal protein rpl12 n=1 Tax=Eurythoe complanata RepID=A8UG21_EURCO 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.362e-19
N-terminus
sp_v3.0_unigene200513 SustainPine v3.0 371
• AutoFact: Ribosomal protein L7a (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7E8_9MOLL 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 9.264e-09
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain