Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene192704 SustainPine v3.0 456
• AutoFact: Ribosomal protein L19 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC86_PHYIT 5.0e-23
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
C-terminus
sp_v3.0_unigene192761 SustainPine v3.0 404
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FUV3_PHATC 4.0e-20
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 8.009e-28
C-terminus
sp_v3.0_unigene192785 SustainPine v3.0 498
• AutoFact: 60S ribosomal protein L21-A n=3 Tax=Schizosaccharomyces RepID=RL21A_SCHPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L21 3.353e-10
Complete
sp_v3.0_unigene192823 SustainPine v3.0 468
• AutoFact: Ribosomal protein n=1 Tax=Daphnia pulex RepID=E9GI92_DAPPU 8.0e-33
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 4.077e-33
C-terminus
sp_v3.0_unigene192853 SustainPine v3.0 424
• AutoFact: 60S ribosomal protein L13 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0VZJ7_9STRA 3.0e-40
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene193005 SustainPine v3.0 424
• AutoFact: S60 ribosomal protein L32 n=1 Tax=Polysphondylium pallidum RepID=D3BI58_POLPA 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 1.887e-07
Complete
sp_v3.0_unigene193091 SustainPine v3.0 432
• AutoFact: 60S ribosomal protein L35 n=6 Tax=Spermatophyta RepID=B3TLM6_ELAGV 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 1.626e-18
Complete
sp_v3.0_unigene193166 SustainPine v3.0 401
• AutoFact: 60S ribosomal protein L4-B (L1) [Arabidopsis thaliana] 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.433e-16
Internal
sp_v3.0_unigene193205 SustainPine v3.0 221
• AutoFact: 60S ribosomal protein L10-1 [Arabidopsis thaliana] gb|AEE29146.1| 60S ribosomal protein L10-1 [Arabidopsis thaliana] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 2.951e-14
Putative C-terminus
sp_v3.0_unigene193238 SustainPine v3.0 318
• AutoFact: Ribosomal protein L3 n=1 Tax=Ectocarpus siliculosus RepID=D7FHR5_ECTSI 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.053e-17
C-terminus
sp_v3.0_unigene193293 SustainPine v3.0 570
• AutoFact: 60S ribosomal protein L4 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N700_PHYIT 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: L1 1.251e-08
Putative C-terminus
sp_v3.0_unigene193311 SustainPine v3.0 607
• AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Chara globularis RepID=Q5KU23_CHAGO 9.80909e-45
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene193316 SustainPine v3.0 559
• AutoFact: Putative 60S ribosomal protein RPL24 n=1 Tax=Flustra foliacea RepID=A9UDT4_9BILA 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene193331 SustainPine v3.0 455
• AutoFact: 60S ribosomal protein L36-1 n=5 Tax=Arabidopsis RepID=RL361_ARATH 3.0e-09
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L36 0.0
Putative Complete
sp_v3.0_unigene193387 SustainPine v3.0 295
• AutoFact: S60 ribosomal protein L10 n=1 Tax=Dictyostelium fasciculatum RepID=F4PJ98_9MYCE 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 9.355e-14
Internal
sp_v3.0_unigene193427 SustainPine v3.0 446
• AutoFact: Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|EE Chain e, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 4.273e-11
C-terminus
sp_v3.0_unigene193429 SustainPine v3.0 478
• AutoFact: PREDICTED: 60S ribosomal protein L7 n=1 Tax=Apis mellifera RepID=UPI00003C0F40 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7, putative 9.59e-11
Putative C-terminus
sp_v3.0_unigene193437 SustainPine v3.0 564
• AutoFact: 60S ribosomal protein L26, putative [Toxoplasma gondii ME49] gb|EEB00046.1| 60S ribosomal protein L26, putative [Toxoplasma gondii ME49] gb|EEE31773.1| 60S ribosomal protein L26, putative [Toxoplasma gondii VEG] 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.437e-11
Complete
sp_v3.0_unigene193459 SustainPine v3.0 369
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Nematostella vectensis RepID=A7S405_NEMVE 7.0e-31
• FL-Next: sp=60S ribosomal protein L13; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene193460 SustainPine v3.0 448
• AutoFact: 60S ribosomal protein L11 [Chlamydomonas incerta] 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain