Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene79530 SustainPine v3.0 303
• AutoFact: Ribosomal protein L32 containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q236T0_TETTH 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene79624 SustainPine v3.0 357
• AutoFact: 60S ribosomal protein L7 n=1 Tax=Sterkiella histriomuscorum RepID=A7Y480_OXYTR 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 9.674e-08
Internal
sp_v3.0_unigene79720 SustainPine v3.0 221
• AutoFact: 60S ribosomal protein L27-B n=4 Tax=Pleosporineae RepID=B2VT56_PYRTR 2.0e-27
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 5.477e-21
Putative N-terminus
sp_v3.0_unigene79767 SustainPine v3.0 396
• AutoFact: ribosomal protein L17 [Castanea sativa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23, putative 7.691e-13
C-terminus
sp_v3.0_unigene79922 SustainPine v3.0 323
• AutoFact: 60S ribosomal protein L34 n=1 Tax=Pichia angusta DL-1 RepID=E7R9C4_PICAD 9.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L34 9.307e-14
Putative Complete
sp_v3.0_unigene80115 SustainPine v3.0 252
• AutoFact: 60S ribosomal protein L7 [Coprinopsis cinerea okayama7#130] gb|EAU88749.1| 60S ribosomal protein L7 [Coprinopsis cinerea okayama7#130] 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.345e-07
Internal
sp_v3.0_unigene80319 SustainPine v3.0 427
• AutoFact: Ribosomal protein L17 n=2 Tax=Branchiostoma RepID=Q6WN59_BRABE 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.13e-08
C-terminus
sp_v3.0_unigene80765 SustainPine v3.0 286
• AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.699e-08
Putative N-terminus
sp_v3.0_unigene80786 SustainPine v3.0 232
• AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 3.887e-17
Misassembled
sp_v3.0_unigene80835 SustainPine v3.0 347
• AutoFact: 60S ribosomal protein l11 (Fragment) n=3 Tax=Magnoliophyta RepID=E5GC34_CUCME 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.667e-11
C-terminus
sp_v3.0_unigene80877 SustainPine v3.0 388
• AutoFact: L3 Ribosomal protein n=1 Tax=Medicago sativa subsp. x varia RepID=Q9SBR8_MEDSV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.342e-17
N-terminus
sp_v3.0_unigene80920 SustainPine v3.0 290
• AutoFact: Ribosomal protein L13a n=2 Tax=Chlamydomonadales RepID=A8IVU0_CHLRE 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 2.222e-20
C-terminus
sp_v3.0_unigene81031 SustainPine v3.0 159
• AutoFact: 60S ribosomal protein L15-1 n=8 Tax=Embryophyta RepID=RL15A_PICMA 4.0e-09
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 3.539e-29
N-terminus
sp_v3.0_unigene81130 SustainPine v3.0 107
• AutoFact: 60S ribosomal protein L7 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3JXM5_PUCGT 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 8.019e-08
Internal
sp_v3.0_unigene81198 SustainPine v3.0 210
• AutoFact: L11 n=1 Tax=Suberites domuncula RepID=Q4KTH5_SUBDO 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.391e-11
Putative C-terminus
sp_v3.0_unigene81548 SustainPine v3.0 159
• AutoFact: Ribosomal protein L37 n=4 Tax=Tremellaceae RepID=E6R2B3_CRYGW 1.0e-11
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Internal
sp_v3.0_unigene81553 SustainPine v3.0 280
• AutoFact: 60S ribosomal protein L10-B n=3 Tax=Pleosporineae RepID=B2VT29_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 8.531e-14
Internal
sp_v3.0_unigene81615 SustainPine v3.0 317
• AutoFact: Ribosomal protein L3 n=4 Tax=Chlorophyta RepID=A8ID84_CHLRE 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.138e-21
Internal
sp_v3.0_unigene98715 SustainPine v3.0 1406
• AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 2.0e-33
• FL-Next: sp=60S ribosomal protein L10; Pinus taeda (Loblolly pine). 0.0
• Sma3: 60S ribosomal protein L10 9.956e-17
Putative Complete
sp_v3.0_unigene102258 SustainPine v3.0 963
• AutoFact: 60S ribosomal protein L12 [Capsicum annuum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.708e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain