Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene77025 SustainPine v3.0 201
• AutoFact: Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|A Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-16
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 5.82e-30
Internal
sp_v3.0_unigene77135 SustainPine v3.0 181
• AutoFact: Ribosomal protein L19 n=1 Tax=Postia placenta Mad-698-R RepID=B8P2X9_POSPM 4.0e-22
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
N-terminus
sp_v3.0_unigene77256 SustainPine v3.0 297
• AutoFact: 60S ribosomal protein L31 n=4 Tax=Chlamydomonadales RepID=RL31_CHLRE 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L31 1.68156e-44
N-terminus
sp_v3.0_unigene77309 SustainPine v3.0 204
• AutoFact: 60S ribosomal protein L27 n=2 Tax=Picea sitchensis RepID=A9NQ84_PICSI 3.0e-23
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Putative C-terminus
sp_v3.0_unigene77345 SustainPine v3.0 430
• AutoFact: Ribosomal protein L19 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NC86_PHYIT 0.0
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
N-terminus
sp_v3.0_unigene77490 SustainPine v3.0 410
• AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 5.088e-14
Internal
sp_v3.0_unigene77516 SustainPine v3.0 302
• AutoFact: 60S ribosomal protein L18a-1 n=2 Tax=Arabidopsis RepID=A8MRF3_ARATH 4.00001e-40
• FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18a 4.479e-13
Internal
sp_v3.0_unigene78234 SustainPine v3.0 352
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
Putative C-terminus
sp_v3.0_unigene78237 SustainPine v3.0 225
• AutoFact: RecName: Full=60S ribosomal protein L4; AltName: Full=L1 gb|AAD32206.1|AF134732_1 60S ribosomal protein L1 [Prunus armeniaca] 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.358e-16
C-terminus
sp_v3.0_unigene78243 SustainPine v3.0 210
• AutoFact: 60S ribosomal protein L37a n=1 Tax=Chlorella variabilis RepID=E1Z5P0_9CHLO 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L37a 1.909e-14
Putative Complete
sp_v3.0_unigene78269 SustainPine v3.0 171
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Chlorella variabilis RepID=E1ZAC3_9CHLO 9.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene78318 SustainPine v3.0 137
• AutoFact: 60S ribosomal protein L35 n=1 Tax=Postia placenta Mad-698-R RepID=B8P320_POSPM 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 3.121e-11
C-terminus
sp_v3.0_unigene78512 SustainPine v3.0 289
• AutoFact: 60S ribosomal protein l12 [Oryza sativa Indica Group] 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 3.328e-17
Putative C-terminus
sp_v3.0_unigene78521 SustainPine v3.0 277
• AutoFact: 60S ribosomal protein L9-2 n=2 Tax=Arabidopsis RepID=RL92_ARATH 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 4.36e-18
C-terminus
sp_v3.0_unigene78548 SustainPine v3.0 186
• AutoFact: Ribosomal protein L19 n=13 Tax=Endopterygota RepID=D6WLJ5_TRICA 6.0e-19
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 0.0
N-terminus
sp_v3.0_unigene78717 SustainPine v3.0 162
• AutoFact: 60S ribosomal protein L11 n=4 Tax=Agaricomycetes RepID=B8P5N8_POSPM 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Internal
sp_v3.0_unigene78720 SustainPine v3.0 278
• AutoFact: Ribosomal protein L15 n=2 Tax=Selaginella moellendorffii RepID=D8QTX2_SELML 1.0e-28
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 0.0
Internal
sp_v3.0_unigene79049 SustainPine v3.0 208
• AutoFact: RL30, ribosomal protein 30 60S large ribosomal subunit n=1 Tax=Thalassiosira pseudonana RepID=B8C0H2_THAPS 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene79283 SustainPine v3.0 308
• AutoFact: PREDICTED: ribosomal protein L8-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBCFE 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 7.824e-09
Internal
sp_v3.0_unigene79409 SustainPine v3.0 243
• AutoFact: 60S ribosomal protein L23 n=2 Tax=Embryophyta RepID=RL23_TORRU 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 7.673e-11
Misassembled

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain