Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75050 SustainPine v3.0 98
• AutoFact: Ribosomal protein L4 n=2 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NNV8_COPC7 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 2.9e-09
Internal
sp_v3.0_unigene75058 SustainPine v3.0 266
• AutoFact: 60s ribosomal protein L10A n=1 Tax=Glossina morsitans morsitans RepID=D3TMC2_GLOMM 4.0e-29
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 1.605e-34
Internal
sp_v3.0_unigene75069 SustainPine v3.0 313
• AutoFact: 60S ribosomal protein L12-3 [Arabidopsis thaliana] sp|Q9FF52.1|RL123_ARATH RecName: Full=60S ribosomal protein L12-3 dbj|BAB09840.1| 60S ribosomal protein L12 [Arabidopsis thaliana] gb|AAK62669.1| AT5g60670/mup24_80 [Arabidopsis thaliana] gb|AAL77726.1| A 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 7.052e-15
C-terminus
sp_v3.0_unigene75109 SustainPine v3.0 332
• AutoFact: 60S ribosomal protein L33 n=4 Tax=Sordariomycetes RepID=Q7S156_NEUCR 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35a, putative 5.167e-09
N-terminus
sp_v3.0_unigene75245 SustainPine v3.0 347
• AutoFact: 60S ribosomal protein L3 n=2 Tax=Agaricomycetes RepID=B8PIG2_POSPM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.138e-21
Internal
sp_v3.0_unigene75305 SustainPine v3.0 313
• AutoFact: [J] COG0256 Ribosomal protein L18 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.708e-14
Internal
sp_v3.0_unigene75500 SustainPine v3.0 203
• AutoFact: PREDICTED: similar to ribosomal protein L8 n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000585096 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L8 6.498e-09
Internal
sp_v3.0_unigene75725 SustainPine v3.0 200
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Monosiga brevicollis RepID=A9UQ35_MONBE 9.0e-16
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 2.344e-20
Internal
sp_v3.0_unigene75799 SustainPine v3.0 281
• AutoFact: 60S ribosomal protein L30-like protein n=6 Tax=Oryza sativa RepID=Q5QMX1_ORYSJ 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene75813 SustainPine v3.0 369
• AutoFact: 60S ribosomal protein L37a-2 n=35 Tax=Embryophyta RepID=R37A2_ARATH 4.0e-33
• FL-Next: sp=60S ribosomal protein L37a; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: 60S ribosomal protein L37a 1.183e-10
Complete
sp_v3.0_unigene75915 SustainPine v3.0 430
• AutoFact: 60S ribosomal protein L24, putative n=2 Tax=fabids RepID=B9SRL5_RICCO 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 1.653e-07
N-terminus
sp_v3.0_unigene75976 SustainPine v3.0 329
• AutoFact: 60S ribosomal protein L2 (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q9LLS6_TOBAC 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L8 6.663e-09
C-terminus
sp_v3.0_unigene76187 SustainPine v3.0 291
• AutoFact: 60S ribosomal protein L26-1 n=3 Tax=Brassicaceae RepID=RL261_ARATH 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 5.135e-11
Putative C-terminus
sp_v3.0_unigene76324 SustainPine v3.0 203
• AutoFact: Putative 60S ribosomal protein RPL17 (Fragment) n=1 Tax=Flustra foliacea RepID=A9UDS6_9BILA 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.165e-08
Internal
sp_v3.0_unigene76346 SustainPine v3.0 339
• AutoFact: 60S ribosomal protein L13 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CPG6_LACBS 4.99983e-42
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
N-terminus
sp_v3.0_unigene76785 SustainPine v3.0 313
• AutoFact: Ribosomal protein L7 (Fragment) n=1 Tax=Lepidochitona cinerea RepID=E3P7E7_9MOLL 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 8.211e-08
Internal
sp_v3.0_unigene76818 SustainPine v3.0 234
• AutoFact: Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|R Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Internal
sp_v3.0_unigene76819 SustainPine v3.0 326
• AutoFact: Similar to 60S ribosomal protein L4 n=1 Tax=Leptosphaeria maculans RepID=E5AAJ6_LEPMC 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.382e-16
Internal
sp_v3.0_unigene76992 SustainPine v3.0 357
• AutoFact: Ribosomal protein L19 n=5 Tax=Picea sitchensis RepID=A9NRT3_PICSI 4.0e-26
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L19 2.263e-15
Putative C-terminus
sp_v3.0_unigene77016 SustainPine v3.0 256
• AutoFact: 60S ribosomal protein L7 [Coprinopsis cinerea okayama7#130] gb|EAU88749.1| 60S ribosomal protein L7 [Coprinopsis cinerea okayama7#130] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 1.206e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain