Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene68368 SustainPine v3.0 316
• AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 2.685e-18
C-terminus
sp_v3.0_unigene71035 SustainPine v3.0 387
• AutoFact: Ribosomal protein L32 n=1 Tax=Triops granarius RepID=B9A0U6_9CRUS 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 1.887e-07
Putative Complete
sp_v3.0_unigene71102 SustainPine v3.0 308
• AutoFact: Ribosomal protein L15 (Fragment) n=14 Tax=Pinaceae RepID=Q9SPX2_PICAB 3.0e-27
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 0.0
C-terminus
sp_v3.0_unigene71264 SustainPine v3.0 387
• AutoFact: Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|D Chain D, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 5.474e-17
Putative C-terminus
sp_v3.0_unigene71855 SustainPine v3.0 155
• AutoFact: 60S ribosomal protein L14-2 [Arabidopsis thaliana] sp|Q9T043.1|RL142_ARATH RecName: Full=60S ribosomal protein L14-2 gb|AAK55672.1|AF378869_1 AT4g27090/T24A18_40 [Arabidopsis thaliana] emb|CAB38839.1| ribosomal protein L14-like protein [Arabidopsis thalia 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60 ribosomal protein L14 3.108e-12
Putative N-terminus
sp_v3.0_unigene73603 SustainPine v3.0 447
• AutoFact: Putative ribosomal protein L26e n=1 Tax=Diaphorina citri RepID=Q0PY02_DIACI 6.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 5.245e-11
N-terminus
sp_v3.0_unigene73714 SustainPine v3.0 497
• AutoFact: 60S ribosomal protein L5 n=1 Tax=Postia placenta Mad-698-R RepID=B8P326_POSPM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L5 1.656e-14
Putative C-terminus
sp_v3.0_unigene73868 SustainPine v3.0 356
• AutoFact: 60S ribosomal protein L27A [Arabidopsis thaliana] 9.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L27a 8.674e-16
N-terminus
sp_v3.0_unigene73913 SustainPine v3.0 284
• AutoFact: 60S ribosomal protein L7A n=6 Tax=Ajellomyces RepID=C0NHA4_AJECG 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.003e-08
Internal
sp_v3.0_unigene73919 SustainPine v3.0 408
• AutoFact: 60S ribosomal protein L27a-3 [Arabidopsis thaliana] ref|XP_002888788.1| 60S ribosomal protein L27A [Arabidopsis lyrata subsp. lyrata] sp|P49637.2|R27A3_ARATH RecName: Full=60S ribosomal protein L27a-3 gb|AAG52338.1|AC011663_17 60S ribosomal protein L27A; 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L27a 9.434e-16
Putative N-terminus
sp_v3.0_unigene73922 SustainPine v3.0 483
• AutoFact: Ribosomal protein L35a n=2 Tax=Chlamydomonadales RepID=A8I0Y2_CHLRE 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35a, putative 6.663e-09
Complete
sp_v3.0_unigene74064 SustainPine v3.0 449
• AutoFact: Ribosomal protein rpl23a n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NSX2_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L23a 3.983e-09
C-terminus
sp_v3.0_unigene74297 SustainPine v3.0 374
• AutoFact: PREDICTED: ribosomal protein L12-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC093 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.015e-19
N-terminus
sp_v3.0_unigene74408 SustainPine v3.0 261
• AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 4.0e-19
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 2.573e-36
C-terminus
sp_v3.0_unigene74462 SustainPine v3.0 448
• AutoFact: 60S ribosomal protein L12 n=1 Tax=Postia placenta Mad-698-R RepID=B8P7S1_POSPM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L12 6.362e-19
N-terminus
sp_v3.0_unigene74468 SustainPine v3.0 392
• AutoFact: 60S ribosomal protein L32 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KL73_PUCGT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 1.887e-07
Putative Complete
sp_v3.0_unigene74633 SustainPine v3.0 228
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene74701 SustainPine v3.0 394
• AutoFact: Ribosomal protein L37 n=1 Tax=Moniliophthora perniciosa FA553 RepID=E2LSH3_MONPE 7.0e-31
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Putative Complete
sp_v3.0_unigene74900 SustainPine v3.0 333
• AutoFact: Ribosomal protein n=3 Tax=Chromadorea RepID=A8NG31_BRUMA 1.0e-23
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L1 6.55e-32
Putative N-terminus
sp_v3.0_unigene74916 SustainPine v3.0 335
• AutoFact: ribosomal protein L41 [Candida maltosa] 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain