Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene52107 SustainPine v3.0 313
• AutoFact: Ribosomal protein L37 n=1 Tax=Picea sitchensis RepID=A9NJS5_PICSI 2.0e-36
• FL-Next: sp=Ribosomal protein L37; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 0.0
Putative N-terminus
sp_v3.0_unigene52355 SustainPine v3.0 177
• AutoFact: Translation protein SH3-like n=1 Tax=Medicago truncatula RepID=Q2HRD6_MEDTR 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene52737 SustainPine v3.0 161
• AutoFact: 60S ribosomal protein L7a-2 [Arabidopsis thaliana] sp|Q9LZH9.1|RL7A2_ARATH RecName: Full=60S ribosomal protein L7a-2 emb|CAB83137.1| 60S RIBOSOMAL PROTEIN L7A protein [Arabidopsis thaliana] gb|AAK97734.1| AT3g62870/F26K9_300 [Arabidopsis thaliana] gb|AAL3 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 5.967e-09
Internal
sp_v3.0_unigene53471 SustainPine v3.0 342
• AutoFact: ribosomal protein L2-like [Solanum tuberosum] 6.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54172 SustainPine v3.0 197
• AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 8.985e-09
N-terminus
sp_v3.0_unigene54513 SustainPine v3.0 459
• AutoFact: 60S ribosomal protein L26 n=2 Tax=Sclerotiniaceae RepID=A6RXB8_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L26 6.311e-11
Complete
sp_v3.0_unigene54676 SustainPine v3.0 344
• AutoFact: pfam01779, Ribosomal_L29e, Ribosomal L29e protein family 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L29 3.622e-08
Putative Complete
sp_v3.0_unigene54784 SustainPine v3.0 483
• AutoFact: 60S ribosomal protein L27A [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative 60S ribosomal protein L27a 5.344e-12
Putative Complete
sp_v3.0_unigene55204 SustainPine v3.0 458
• AutoFact: ribosomal protein L32 [Medicago sativa] 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L32 2.605e-11
C-terminus
sp_v3.0_unigene55313 SustainPine v3.0 425
• AutoFact: 60S ribosomal protein L37a n=1 Tax=Chlorella variabilis RepID=E1Z5P0_9CHLO 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L37a 1.156e-10
Putative Complete
sp_v3.0_unigene55407 SustainPine v3.0 342
• AutoFact: Ribosomal protein L7 (Fragment) n=1 Tax=Crassostrea gigas RepID=Q7Z0P7_CRAGI 9.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7-2 9.259e-08
Internal
sp_v3.0_unigene55579 SustainPine v3.0 319
• AutoFact: 60S ribosomal protein L4/L1/L2 n=1 Tax=Postia placenta Mad-698-R RepID=B8P757_POSPM 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L4 1.129e-16
Internal
sp_v3.0_unigene55768 SustainPine v3.0 247
• AutoFact: ribosomal protein L3-A3 [Triticum aestivum] gb|ABK63943.1| ribosomal protein L3-A3 [Triticum aestivum] tpg|DAA01148.1| TPA_inf: ribosomal protein L3A-3 [Triticum aestivum] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 5.831e-18
Internal
sp_v3.0_unigene55855 SustainPine v3.0 332
• AutoFact: Ribosomal protein rpl6 n=1 Tax=Eurythoe complanata RepID=A8UFZ6_EURCO 9.94922e-44
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene56299 SustainPine v3.0 328
• AutoFact: RecName: Full=60S ribosomal protein L39; AltName: Full=L46 gb|AAK60140.1|AF365406_2 ribosomal protein L39 [Candida albicans] 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L39 1.024e-13
Complete
sp_v3.0_unigene56376 SustainPine v3.0 487
• AutoFact: 60S ribosomal protein l17 n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XM07_GROCL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
N-terminus
sp_v3.0_unigene56568 SustainPine v3.0 226
• AutoFact: RecName: Full=60S ribosomal protein L23a gb|AAK30202.1|AF349961_1 ribosome protein L23a [Daucus carota] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23a 2.918e-10
Internal
sp_v3.0_unigene56574 SustainPine v3.0 507
• AutoFact: Ribosomal protein L15 n=1 Tax=Leptosphaeria maculans RepID=E4ZSH7_LEPMC 0.0
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 0.0
Internal
sp_v3.0_unigene56580 SustainPine v3.0 133
• AutoFact: Ribosomal protein L15 n=1 Tax=Leptosphaeria maculans RepID=E4ZSH7_LEPMC 1.0e-05
• FL-Next: sp=Ribosomal protein L15; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L15 2.247e-38
Internal
sp_v3.0_unigene57329 SustainPine v3.0 111
• AutoFact: 60S ribosomal protein L18a-1 n=2 Tax=Arabidopsis RepID=A8MRF3_ARATH 1.0e-13
• FL-Next: sp=60S ribosomal protein L18a; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18a 2.911e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain