Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35982 SustainPine v3.0 524
• AutoFact: 60S ribosomal protein L27 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZQ7_PHYIT 5.0e-31
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L27 0.0
Complete
sp_v3.0_unigene36315 SustainPine v3.0 649
• AutoFact: 60S ribosomal protein L31-3 [Arabidopsis thaliana] gb|AED96799.1| 60S ribosomal protein L31-3 [Arabidopsis thaliana] 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L31 1.432e-36
C-terminus
sp_v3.0_unigene36332 SustainPine v3.0 586
• AutoFact: RecName: Full=60S ribosomal protein L24 emb|CAA12358.1| ribosomal protein L24 [Cicer arietinum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L24 2.651e-07
Putative Complete
sp_v3.0_unigene36438 SustainPine v3.0 565
• AutoFact: 60S ribosomal protein L36 n=4 Tax=Pleosporineae RepID=B2WFQ1_PYRTR 3.0e-40
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L36 0.0
Complete
sp_v3.0_unigene36603 SustainPine v3.0 657
• AutoFact: 60S ribosomal protein l7a [Oryza sativa Indica Group] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.362e-08
Putative C-terminus
sp_v3.0_unigene36631 SustainPine v3.0 656
• AutoFact: 60S ribosomal protein L36 n=2 Tax=Picea sitchensis RepID=A9NKW3_PICSI 4.0e-25
• FL-Next: sp=60S ribosomal protein L36; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L36 0.0
C-terminus
sp_v3.0_unigene36639 SustainPine v3.0 606
• AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 7.763e-14
N-terminus
sp_v3.0_unigene37561 SustainPine v3.0 1066
• AutoFact: putative 60S ribosomal protein L35 [Rheum australe] 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 3.65e-18
Complete
sp_v3.0_unigene37724 SustainPine v3.0 329
• AutoFact: 60S ribosomal protein L13a n=3 Tax=Picea RepID=RL13A_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13a 6.696e-21
Internal
sp_v3.0_unigene37787 SustainPine v3.0 733
• AutoFact: 60S ribosomal protein L13 n=4 Tax=Picea RepID=A9NTR4_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L13; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L13 0.0
C-terminus
sp_v3.0_unigene37887 SustainPine v3.0 1457
• AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 1.547e-17
Complete
sp_v3.0_unigene37888 SustainPine v3.0 802
• AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L9 2.553e-14
C-terminus
sp_v3.0_unigene37975 SustainPine v3.0 1217
• AutoFact: 60S ribosomal protein L10 n=2 Tax=Pinaceae RepID=RL10_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 3.522e-10
Complete
sp_v3.0_unigene40607 SustainPine v3.0 2393
• AutoFact: [J] COG0090 Ribosomal protein L2 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene43481 SustainPine v3.0 188
• AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L35 1.475e-07
Putative N-terminus
sp_v3.0_unigene49586 SustainPine v3.0 1223
• AutoFact: 60S ribosomal protein L10-like protein n=1 Tax=Wolffia arrhiza RepID=D2JYR9_WOLAR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L10 1.042e-13
Putative Complete
sp_v3.0_unigene51430 SustainPine v3.0 582
• AutoFact: RecName: Full=60S ribosomal protein L34 gb|AAA57158.1| 60S ribosomal protein L34 [Nicotiana tabacum] gb|AAA57159.1| 60S ribosomal protein L34 [Nicotiana tabacum] 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L34 2.495e-10
Putative Complete
sp_v3.0_unigene51448 SustainPine v3.0 451
• AutoFact: 60S ribosomal protein L23 n=41 Tax=Embryophyta RepID=RL23_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L23 1.33e-10
Complete
sp_v3.0_unigene51451 SustainPine v3.0 699
• AutoFact: Ribosomal protein L7A (Fragment) n=1 Tax=Bigelowiella natans RepID=Q3SAE2_BIGNA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L7a, putative 1.295e-08
N-terminus
sp_v3.0_unigene51700 SustainPine v3.0 394
• AutoFact: PREDICTED: 60S ribosomal protein L6-like n=1 Tax=Anolis carolinensis RepID=UPI000203A4D7 1.0e-36
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain