Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent RNA helicase, putative

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene43280 SustainPine v3.0 303
AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 1.4013e-45
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.495e-16
Internal
sp_v3.0_unigene45677 SustainPine v3.0 170
AutoFact: putative helicase [Oryza sativa Japonica Group] 9.0e-24
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.937e-09
Internal
sp_v3.0_unigene46471 SustainPine v3.0 282
AutoFact: DEAD/DEAH box helicase [Dictyostelium discoideum AX4] sp|Q54MH3.1|DHX16_DICDI RecName: Full=Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; AltName: Full=DEAH-box protein 16 gb|EAL64503.1| DEAD/DEAH box helicase [Dictyostelium discoide 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.925e-21
N-terminus
sp_v3.0_unigene47270 SustainPine v3.0 143
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 7.0e-07
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.304e-14
Internal
sp_v3.0_unigene49780 SustainPine v3.0 451
AutoFact: Helicase, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C873_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.349e-12
Internal
sp_v3.0_unigene56830 SustainPine v3.0 496
AutoFact: DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] dbj|BAB11511.1| ATP-dependent RNA helicase A-like protein [Arabidopsis thaliana] gb|AED90801.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.686e-09
Putative N-terminus
sp_v3.0_unigene59574 SustainPine v3.0 275
AutoFact: DEA(D/H)-box RNA helicase family protein n=4 Tax=Arabidopsis RepID=F4HYJ6_ARATH 2.0e-40
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.605e-13
Internal
sp_v3.0_unigene60505 SustainPine v3.0 116
AutoFact: Putative helicase n=1 Tax=Oryza sativa RepID=Q8W302_ORYSA 2.0e-13
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.982e-09
Internal
sp_v3.0_unigene61192 SustainPine v3.0 405
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.453e-09
Internal
sp_v3.0_unigene61692 SustainPine v3.0 243
AutoFact: RNA helicase - like protein [Arabidopsis thaliana] emb|CAB78848.1| RNA helicase-like protein [Arabidopsis thaliana] 5.0e-30
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.335e-21
Internal
sp_v3.0_unigene63305 SustainPine v3.0 169
AutoFact: ATP-dependent RNA helicase A-like protein n=2 Tax=Arabidopsis RepID=Q9FF84_ARATH 3.0e-14
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.145e-09
Internal
sp_v3.0_unigene68057 SustainPine v3.0 131
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 5.0e-11
FL-Next: tr=ATP-dependent RNA helicase Dhx29; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.01e-12
Internal
sp_v3.0_unigene73970 SustainPine v3.0 294
AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001985AA9 9.00054e-42
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.276e-18
Internal
sp_v3.0_unigene75005 SustainPine v3.0 196
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.161e-18
N-terminus
sp_v3.0_unigene75568 SustainPine v3.0 194
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 2.0e-18
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.12e-09
Internal
sp_v3.0_unigene79551 SustainPine v3.0 261
AutoFact: putative helicase [Oryza sativa Japonica Group] 3.99931e-42
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.182e-11
Internal
sp_v3.0_unigene81530 SustainPine v3.0 179
AutoFact: ATP-dependent RNA helicase, putative-related [Oryza sativa Japonica Group] gb|AAX96100.1| Similar to ATP-dependent RNA helicase, putative [Oryza sativa Japonica Group] 2.0e-20
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.699e-24
Internal
sp_v3.0_unigene97269 SustainPine v3.0 1305
AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.094e-34
Internal
sp_v3.0_unigene99025 SustainPine v3.0 442
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AAK96883.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AAM91118.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AEE30889.1| helicase associated d 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.81e-07
C-terminus
sp_v3.0_unigene99096 SustainPine v3.0 261
AutoFact: pfam07717, OB_NTP_bind, Oligonucleotide/oligosaccharide-binding (OB)-fold 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.918e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain