Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATP-dependent RNA helicase, putative

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene269 SustainPine v3.0 725
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SDJ7_RICCO 0.0
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.148e-11
Internal
sp_v3.0_unigene1566 SustainPine v3.0 1672
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.085e-09
C-terminus
sp_v3.0_unigene2493 SustainPine v3.0 1993
AutoFact: pfam07717, OB_NTP_bind, Oligonucleotide/oligosaccharide-binding (OB)-fold 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.482e-18
Putative Complete
sp_v3.0_unigene3054 SustainPine v3.0 2942
AutoFact: PREDICTED: similar to helicase domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983869 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.178e-06
Putative Complete
sp_v3.0_unigene3177 SustainPine v3.0 1741
AutoFact: Putative ATP-dependent RNA helicase n=1 Tax=Oryza sativa RepID=Q9FW67_ORYSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.555e-16
Putative Complete
sp_v3.0_unigene3306 SustainPine v3.0 2469
AutoFact: putative RNA helicase [Oryza sativa Japonica Group] dbj|BAD35820.1| putative RNA helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.491e-19
Complete
sp_v3.0_unigene4743 SustainPine v3.0 551
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 3.955e-16
Putative N-terminus
sp_v3.0_unigene6367 SustainPine v3.0 2712
AutoFact: ATP-dependent RNA helicase DHX8/PRP22 [Arabidopsis thaliana] sp|Q38953.2|DHX8_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase dbj|BAB01838.1| pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis th 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.56e-40
N-terminus
sp_v3.0_unigene7109 SustainPine v3.0 2504
AutoFact: putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Arabidopsis thaliana] sp|O22899.1|DHX15_ARATH RecName: Full=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase gb|AAB63825.1| putative pre-mRNA splicing factor RNA helicase [Arabidops 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 2.469e-18
Complete
sp_v3.0_unigene7374 SustainPine v3.0 2555
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.311e-24
Putative Complete
sp_v3.0_unigene9288 SustainPine v3.0 1973
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 8.102e-14
N-terminus
sp_v3.0_unigene13071 SustainPine v3.0 1369
AutoFact: pre-mRNA splicing factor ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.39e-18
Internal
sp_v3.0_unigene13576 SustainPine v3.0 380
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 4.47e-11
Internal
sp_v3.0_unigene14334 SustainPine v3.0 517
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AAK96883.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AAM91118.1| ATP-dependent RNA helicase, putative [Arabidopsis thaliana] gb|AEE30889.1| helicase associated d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 9.009e-07
Internal
sp_v3.0_unigene15851 SustainPine v3.0 631
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.085e-09
Internal
sp_v3.0_unigene15866 SustainPine v3.0 683
AutoFact: ATP-dependent RNA helicase, putative 4.0e-29
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 5.366e-13
Putative N-terminus
sp_v3.0_unigene24027 SustainPine v3.0 1357
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Arabidopsis thaliana] gb|AAL67014.1| putative RNA helicase [Arabidopsis thaliana] gb|AAM91806.1| putative RNA helicase [Arabidopsis thaliana] gb|AEE31492.1| pre-mRNA-splicing factor ATP-dependent 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.004e-20
Putative C-terminus
sp_v3.0_unigene41078 SustainPine v3.0 181
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RMI9_RICCO 5.0e-19
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 7.871e-07
Internal
sp_v3.0_unigene41992 SustainPine v3.0 156
AutoFact: helicase associated domain-containing protein [Arabidopsis thaliana] gb|AEE33493.1| helicase associated domain-containing protein [Arabidopsis thaliana] 7.0e-19
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: ATP-dependent RNA helicase, putative 6.053e-16
Internal
sp_v3.0_unigene42983 SustainPine v3.0 1143
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent RNA helicase, putative 1.995e-16
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain