Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: primary shoot apical meristem specification

Term: GO:0010072  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene263 SustainPine v3.0 2184
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 2.765e-09
Putative Complete
sp_v3.0_unigene624 SustainPine v3.0 2918
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.062e-11
C-terminus
sp_v3.0_unigene625 SustainPine v3.0 301
• AutoFact: WD-40 repeat protein-like (Fragment) n=1 Tax=Populus suaveolens RepID=Q1HIU4_9ROSI 3.0e-15
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 3.815e-07
Internal
sp_v3.0_unigene654 SustainPine v3.0 1453
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.547e-09
Putative C-terminus
sp_v3.0_unigene704 SustainPine v3.0 2043
• AutoFact: No apical meristem (NAM) protein n=1 Tax=Medicago truncatula RepID=A2Q3I9_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene2753 SustainPine v3.0 5002
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.451e-11
Complete
sp_v3.0_unigene3467 SustainPine v3.0 2205
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene3809 SustainPine v3.0 1437
• AutoFact: homeodomain protein HB2 [Populus tomentosa] 0.0
• FL-Next: sp=WUSCHEL-related homeobox 8; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: WUSCHEL-related homeobox 14 3.401e-08
Complete
sp_v3.0_unigene4623 SustainPine v3.0 396
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene5045 SustainPine v3.0 3143
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Putative Complete
sp_v3.0_unigene8600 SustainPine v3.0 989
• AutoFact: Class III HD-Zip protein HDZ35 (Fragment) n=1 Tax=Pinus taeda RepID=Q0Q417_PINTA 0.0
• FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Class III homeodomain-leucine zipper 9.352e-27
Internal
sp_v3.0_unigene8805 SustainPine v3.0 490
• AutoFact: Class III homeodomain-leucine zipper n=2 Tax=Psilotum nudum RepID=Q1WD31_PSINU 3.0e-11
• FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Sma3: Class III homeodomain-leucine zipper 9.791e-27
N-terminus
sp_v3.0_unigene9089 SustainPine v3.0 2424
• AutoFact: No apical meristem-related protein n=1 Tax=Phoenix dactylifera RepID=F2WAC7_PHODC 0.0
• FL-Next: tr=NAC-domain containing protein 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene11469 SustainPine v3.0 3020
• AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene11957 SustainPine v3.0 447
• AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.624e-33
Internal
sp_v3.0_unigene12137 SustainPine v3.0 2134
• AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
• FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 2.023e-33
C-terminus
sp_v3.0_unigene12667 SustainPine v3.0 3184
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 7.938e-12
Putative Complete
sp_v3.0_unigene13079 SustainPine v3.0 1635
• AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 2.811e-09
Putative Complete
sp_v3.0_unigene14173 SustainPine v3.0 714
• AutoFact: NO APICAL MERISTEM2 n=2 Tax=Pisum sativum RepID=B8XS03_PEA 0.0
• FL-Next: tr=Cup-shaped cotyledon; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene17349 SustainPine v3.0 3114
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Beta transducin-like protein, putative 3.64e-08
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain