Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: response to gamma radiation

Term: GO:0010332  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene262 SustainPine v3.0 778
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 super family 1.757e-18
Putative N-terminus
sp_v3.0_unigene667 SustainPine v3.0 2713
• AutoFact: DNA repair and recombination protein RAD54B, putative n=1 Tax=Ricinus communis RepID=B9RYJ2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 super family 6.56e-12
Complete
sp_v3.0_unigene1971 SustainPine v3.0 2114
• AutoFact: Cyclin B1-2 [Daucus carota] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB1 1.626e-18
Complete
sp_v3.0_unigene5650 SustainPine v3.0 2257
• AutoFact: putative BRCT domain-containing protein [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Protein BREAST CANCER SUSCEPTIBILITY 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Brca1 associated ring domain, putative 5.669e-09
C-terminus
sp_v3.0_unigene8045 SustainPine v3.0 1694
• AutoFact: Excision repair cross-complementing 1 ercc1, putative n=1 Tax=Ricinus communis RepID=B9RF25_RICCO 0.0
• FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene9693 SustainPine v3.0 1206
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene10641 SustainPine v3.0 2057
• AutoFact: cyclin B1 [Nicotiana tabacum] 0.0
• FL-Next: tr=Cyclin B;1; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: CycB2 6.021e-22
Complete
sp_v3.0_unigene11294 SustainPine v3.0 1316
• AutoFact: Mitotic cyclin B1 n=1 Tax=Persea americana RepID=D2KQP3_PERAE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB1 4.163e-21
N-terminus
sp_v3.0_unigene12236 SustainPine v3.0 1047
• AutoFact: RecName: Full=Serine/threonine-protein kinase ATR dbj|BAD61693.1| putative AtRAD3 [Oryza sativa Japonica Group] dbj|BAD62537.1| putative AtRAD3 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Serine/threonine-protein kinase ATR; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Serine/threonine-protein kinase ATR 2.245e-08
C-terminus
sp_v3.0_unigene12669 SustainPine v3.0 1162
• AutoFact: Cyclin B, putative n=1 Tax=Ricinus communis RepID=B9R8N2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB1 4.461e-22
C-terminus
sp_v3.0_unigene13326 SustainPine v3.0 1779
• AutoFact: Cyclin B, putative n=1 Tax=Ricinus communis RepID=B9R8N2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB2 7.659e-22
C-terminus
sp_v3.0_unigene13765 SustainPine v3.0 874
• AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyclin 2.188e-20
C-terminus
sp_v3.0_unigene20656 SustainPine v3.0 444
• AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB2 1.898e-22
C-terminus
sp_v3.0_unigene39388 SustainPine v3.0 1033
• AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB1 8.152e-21
Putative C-terminus
sp_v3.0_unigene41071 SustainPine v3.0 439
• AutoFact: serine/threonine-protein kinase ATR [Arabidopsis thaliana] sp|Q9FKS4.2|ATR_ARATH RecName: Full=Serine/threonine-protein kinase ATR; Short=AtATR; AltName: Full=Ataxia telangiectasia-mutated and Rad3-related homolog; AltName: Full=DNA repair protein ATR; Al 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine-protein kinase ATR 7.595e-08
Putative N-terminus
sp_v3.0_unigene41181 SustainPine v3.0 265
• AutoFact: Probable G2/mitotic-specific cyclin (Fragment) n=1 Tax=Picea mariana RepID=O65064_PICMA 9.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CycB1 9.987e-19
Internal
sp_v3.0_unigene45039 SustainPine v3.0 254
• AutoFact: DNA excision repair protein E n=2 Tax=Arabidopsis RepID=Q9ZV43_ARATH 1.0e-35
• FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene46343 SustainPine v3.0 499
• AutoFact: cyclin [Adiantum capillus-veneris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyclin A-like protein 3.149e-19
Internal
sp_v3.0_unigene48117 SustainPine v3.0 386
• AutoFact: Transcription-coupled repair protein CSB/RAD26 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCT4_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53184 SustainPine v3.0 348
• AutoFact: Serine/threonine-protein kinase ATR n=4 Tax=Oryza sativa RepID=ATR_ORYSJ 1.0e-38
• FL-Next: sp=Serine/threonine-protein kinase ATR; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Serine/threonine-protein kinase ATR 1.251e-08
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain