Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of gene expression, epigenetic

Term: GO:0040029  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene252 SustainPine v3.0 1729
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 2.211e-18
Complete
sp_v3.0_unigene340 SustainPine v3.0 5840
• AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 2.792e-14
Putative Complete
sp_v3.0_unigene1753 SustainPine v3.0 7119
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 super family 5.128e-13
Complete
sp_v3.0_unigene3679 SustainPine v3.0 4014
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.416e-16
Complete
sp_v3.0_unigene6640 SustainPine v3.0 2093
• AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene6666 SustainPine v3.0 3232
• AutoFact: ISWI chromatin remodeling complex ATPase ISW1, putative n=1 Tax=Ricinus communis RepID=B9S6I7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SNF2 super family 1.796e-12
Complete
sp_v3.0_unigene7317 SustainPine v3.0 3917
• AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SHW2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SET domain protein 7.183e-15
Complete
sp_v3.0_unigene7349 SustainPine v3.0 2039
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
• FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 2.293e-16
C-terminus
sp_v3.0_unigene9831 SustainPine v3.0 2609
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 5'->3' exoribonuclease, putative 2.888e-16
Complete
sp_v3.0_unigene10173 SustainPine v3.0 256
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 5.0e-38
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 3.297e-16
Internal
sp_v3.0_unigene13903 SustainPine v3.0 662
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 6.254e-16
Internal
sp_v3.0_unigene13924 SustainPine v3.0 949
• AutoFact: RecName: Full=Histone-lysine N-methyltransferase ASHH2; AltName: Full=ASH1 homolog 2; AltName: Full=H3-K4-HMTase; AltName: Full=Histone H3-K36 methyltransferase 8; Short=H3-K36-HMTase 8; AltName: Full=Protein EARLY FLOWERING IN SHORT DAYS; AltName: Full=P 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SET domain protein 4.218e-13
Putative C-terminus
sp_v3.0_unigene18769 SustainPine v3.0 2868
• AutoFact: SET domain protein SDG111 [Zea mays] gb|AAO32934.2| SET domain protein SDG111 [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: SET domain protein 3.165e-12
Complete
sp_v3.0_unigene22301 SustainPine v3.0 421
• AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 6.254e-16
N-terminus
sp_v3.0_unigene25224 SustainPine v3.0 1176
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.808e-16
N-terminus
sp_v3.0_unigene29272 SustainPine v3.0 729
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 1.359e-29
Putative C-terminus
sp_v3.0_unigene29752 SustainPine v3.0 2409
• AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 0.0
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 8.416e-16
N-terminus
sp_v3.0_unigene34556 SustainPine v3.0 372
• AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 2.0e-35
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
• Sma3: 5'->3' exoribonuclease, putative 4.786e-16
Internal
sp_v3.0_unigene35211 SustainPine v3.0 358
• AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9RET3_RICCO 0.0
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: 5'->3' exoribonuclease, putative 3.297e-16
Internal
sp_v3.0_unigene37207 SustainPine v3.0 2019
• AutoFact: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Arabidopsis thaliana] sp|Q8GZB6.2|SUVH4_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; AltName: Full=Histone H3-K9 methyltransferase 4; Short=H3-K9-HMTase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone-lysine n-methyltransferase, suvh, putative 1.821e-13
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain