Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of gene expression, epigenetic

Term: GO:0040029  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37661 SustainPine v3.0 3746
AutoFact: Os01g0872700 protein n=3 Tax=Oryza sativa RepID=Q5N739_ORYSJ 0.0
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 5'->3' exoribonuclease, putative 5.109e-16
Complete
sp_v3.0_unigene37804 SustainPine v3.0 1917
AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 5'->3' exoribonuclease, putative 1.795e-16
Complete
sp_v3.0_unigene43699 SustainPine v3.0 386
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SZ00_RICCO 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone-lysine n-methyltransferase, suvh, putative 6.06e-10
Internal
sp_v3.0_unigene46130 SustainPine v3.0 561
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 3.709e-32
Internal
sp_v3.0_unigene48335 SustainPine v3.0 391
AutoFact: SDG8 n=3 Tax=Arabidopsis thaliana RepID=A9QA57_ARATH 8.0e-30
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 0.0
Sma3: SET domain protein 4.765e-06
Internal
sp_v3.0_unigene49588 SustainPine v3.0 1527
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SHW2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain protein 8.329e-20
Putative N-terminus
sp_v3.0_unigene50013 SustainPine v3.0 189
AutoFact: histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] gb|AEE35961.1| histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] 2.0e-18
FL-Next: sp=Histone-lysine N-methyltransferase ASHH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 4.079e-06
Internal
sp_v3.0_unigene51650 SustainPine v3.0 157
AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t 8.0e-12
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Sma3: 5'->3' exoribonuclease, putative 4.798e-08
Internal
sp_v3.0_unigene52753 SustainPine v3.0 170
AutoFact: SWI/SNF class chromatin remodeling complex protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSB9_PHYPA 1.0e-09
FL-Next: sp=ATP-dependent helicase BRM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWI/SNF class chromatin remodeling complex protein 1.427e-08
Internal
sp_v3.0_unigene57780 SustainPine v3.0 124
AutoFact: Unassigned protein
FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene67351 SustainPine v3.0 314
AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t 2.0e-19
FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 5'->3' exoribonuclease, putative 1.06e-11
Internal
sp_v3.0_unigene73703 SustainPine v3.0 470
AutoFact: RecName: Full=Helicase SWR1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene93612 SustainPine v3.0 1821
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromatin remodeling complex subunit 9.648e-28
Putative Complete
sp_v3.0_unigene95954 SustainPine v3.0 431
AutoFact: 5'->3' exoribonuclease, putative n=1 Tax=Ricinus communis RepID=B9R871_RICCO 0.0
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Sma3: 5'->3' exoribonuclease, putative 4.978e-16
Internal
sp_v3.0_unigene102447 SustainPine v3.0 770
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Sma3: 5'->3' exoribonuclease, putative 6.73e-16
Internal
sp_v3.0_unigene102773 SustainPine v3.0 562
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTY5_RICCO 0.0
FL-Next: sp=Probable chromatin-remodeling complex ATPase chain; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: SWI2/SNF2-like protein 1.397e-14
Internal
sp_v3.0_unigene108339 SustainPine v3.0 264
AutoFact: histone methyltransferase [Arabidopsis thaliana] sp|O22781.1|SUVH2_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2; AltName: Full=Cytosine-HMTase 2; AltName: Full=H3-K27-HMTase 2; 2.0e-23
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SET domain protein 5.82e-08
Internal
sp_v3.0_unigene109379 SustainPine v3.0 419
AutoFact: RecName: Full=Histone-lysine N-methyltransferase ASHH2; AltName: Full=ASH1 homolog 2; AltName: Full=H3-K4-HMTase; AltName: Full=Histone H3-K36 methyltransferase 8; Short=H3-K36-HMTase 8; AltName: Full=Protein EARLY FLOWERING IN SHORT DAYS; AltName: Full=P 2.0e-28
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ASHH2 OS=Arabidopsis thaliana GN=ASHH2 0.0
Sma3: SET domain protein 4.079e-06
Internal
sp_v3.0_unigene110889 SustainPine v3.0 348
AutoFact: DNA helicase INO80 complex-like 1 n=1 Tax=Arabidopsis thaliana RepID=F4J277_ARATH 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 9.252e-19
Internal
sp_v3.0_unigene110901 SustainPine v3.0 449
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SHW2_RICCO 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain