Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene157846 SustainPine v3.0 304
• AutoFact: Ubiquitin carrier protein n=1 Tax=Anopheles darlingi RepID=E3X124_ANODA 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
C-terminus
sp_v3.0_unigene157975 SustainPine v3.0 556
• AutoFact: DNA damage-binding protein 1a n=5 Tax=Brassicaceae RepID=DDB1A_ARATH 0.0
• FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene157980 SustainPine v3.0 160
• AutoFact: Ubiquitin carrier protein n=3 Tax=Paramecium tetraurelia RepID=A0CVX3_PARTE 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 3.555e-18
Internal
sp_v3.0_unigene158173 SustainPine v3.0 447
• AutoFact: Autophagy-related protein 8 n=3 Tax=Oomycetes RepID=ATG8_PHYIN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Autophagy-related ubiquitin-like modifier ATG8 0.0
Complete
sp_v3.0_unigene158367 SustainPine v3.0 431
• AutoFact: Ubiquitin-activating enzyme E1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N735_PHYIT 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 5.50304e-41
Internal
sp_v3.0_unigene159747 SustainPine v3.0 362
• AutoFact: Similarity to RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9LS98_ARATH 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.886e-12
C-terminus
sp_v3.0_unigene159783 SustainPine v3.0 354
• AutoFact: ZEITLUPE [Mesembryanthemum crystallinum] 5.0e-20
• FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene159833 SustainPine v3.0 440
• AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 9.0e-29
• FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene160153 SustainPine v3.0 240
• AutoFact: Putative ubiquitin-conjugating enzyme E2 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q3I2_9MYCE 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative C-terminus
sp_v3.0_unigene160786 SustainPine v3.0 432
• AutoFact: Ubiquitin carrier protein n=1 Tax=Zea mays RepID=C0P584_MAIZE 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene161299 SustainPine v3.0 214
• AutoFact: E3 ubiquitin-protein ligase PUB22 [Arabidopsis thaliana] sp|Q9SVC6.1|PUB22_ARATH RecName: Full=E3 ubiquitin-protein ligase PUB22; AltName: Full=Plant U-box protein 22; AltName: Full=U-box domain-containing protein 22 emb|CAB43434.1| putative protein [Arab 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr8 scaffold_99, whole genome shotgun sequence 1.105e-08
N-terminus
sp_v3.0_unigene161386 SustainPine v3.0 334
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene162037 SustainPine v3.0 344
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 5.487e-10
Putative C-terminus
sp_v3.0_unigene162055 SustainPine v3.0 377
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 2.283e-18
Internal
sp_v3.0_unigene162346 SustainPine v3.0 239
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RMH5_RICCO 1.0e-13
• FL-Next: sp=U-box domain-containing protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene162754 SustainPine v3.0 359
• AutoFact: Ubiquitin carrier protein n=4 Tax=Sordariomycetes RepID=A4RCJ4_MAGO7 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.553e-15
N-terminus
sp_v3.0_unigene162797 SustainPine v3.0 302
• AutoFact: ubiquitin-like protein [Pisum sativum] 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-like protein SMT3 7.912e-16
C-terminus
sp_v3.0_unigene164675 SustainPine v3.0 237
• AutoFact: Probable Ufm1-specific protease n=4 Tax=Arabidopsis RepID=UFSP_ARATH 8.0e-35
• FL-Next: sp=Probable Ufm1-specific protease; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: UfSP 5.358e-10
Internal
sp_v3.0_unigene164778 SustainPine v3.0 255
• AutoFact: similar to eukaryotic protein kinase domains (Pfam: pkinase.hmm, score: 171.43) [Arabidopsis thaliana] 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 6.864e-16
Internal
sp_v3.0_unigene165211 SustainPine v3.0 266
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 6.0e-08
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: E3 ubiquitin ligase 1.791e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain