Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene142589 SustainPine v3.0 458
• AutoFact: ubiquitin-like protein [Pisum sativum] 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-like protein SMT3 7.691e-16
Complete
sp_v3.0_unigene143084 SustainPine v3.0 462
• AutoFact: Ubiquitin-conjugating enzyme 13, E2 n=3 Tax=Embryophyta RepID=D8QMV8_SELML 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
Putative N-terminus
sp_v3.0_unigene143515 SustainPine v3.0 325
• AutoFact: Ubiquitin carrier protein n=1 Tax=Ricinus communis RepID=B9SRR5_RICCO 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.55544e-43
Misassembled
sp_v3.0_unigene144008 SustainPine v3.0 708
• AutoFact: Otubain-like cysteine protease n=2 Tax=Pinaceae RepID=A5YBN2_PINRA 0.0
• FL-Next: tr=Otubain-like cysteine protease; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: Otubain-like cysteine protease 1.354e-09
C-terminus
sp_v3.0_unigene144184 SustainPine v3.0 789
• AutoFact: F-box family protein n=4 Tax=fabids RepID=B9H7S3_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoric diester hydrolase, putative 4.381e-19
C-terminus
sp_v3.0_unigene144576 SustainPine v3.0 561
• AutoFact: Tubby-like F-box protein 14 n=3 Tax=Oryza sativa RepID=TLP14_ORYSJ 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubby-like protein 3.28e-22
C-terminus
sp_v3.0_unigene144652 SustainPine v3.0 400
• AutoFact: Ubiquitin carrier protein n=1 Tax=Sorghum bicolor RepID=C5XGM7_SORBI 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 3.401e-19
Internal
sp_v3.0_unigene144802 SustainPine v3.0 640
• AutoFact: putative ring-box Roc1/Rbx1/Hrt1 protein [Olimarabidopsis pumila] 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-box protein 1a 9.115e-17
C-terminus
sp_v3.0_unigene147988 SustainPine v3.0 281
• AutoFact: Autophagy-related protein 3 n=1 Tax=Picea sitchensis RepID=A9NVL1_PICSI 1.0e-23
• FL-Next: sp=Autophagy-related protein 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Autophagy-related protein 3 3.62e-31
C-terminus
sp_v3.0_unigene148150 SustainPine v3.0 266
• AutoFact: Small ubiquitin-related modifier 1 n=2 Tax=Arabidopsis RepID=SUMO1_ARATH 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-like protein SMT3 2.995e-08
N-terminus
sp_v3.0_unigene148835 SustainPine v3.0 290
• AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 3.795e-08
Internal
sp_v3.0_unigene149651 SustainPine v3.0 105
• AutoFact: RING-H2 finger protein ATL3C, putative n=1 Tax=Ricinus communis RepID=B9S4E7_RICCO 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL5A 4.278e-07
Internal
sp_v3.0_unigene149808 SustainPine v3.0 264
• AutoFact: U-box domain-containing protein 9 [Arabidopsis thaliana] sp|Q9SRT0.1|PUB9_ARATH RecName: Full=U-box domain-containing protein 9; AltName: Full=Plant U-box protein 9 gb|AAF02146.1|AC009853_6 hypothetical protein [Arabidopsis thaliana] gb|AAL91644.1| AT3g07 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene150107 SustainPine v3.0 385
• AutoFact: probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] ref|XP_714470.1| probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] gb|EAK95408.1| probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] gb|EAK95463.1| prob 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 5.523e-09
C-terminus
sp_v3.0_unigene150230 SustainPine v3.0 385
• AutoFact: PREDICTED: similar to HECT, UBA and WWE domain containing 1 n=1 Tax=Hydra magnipapillata RepID=UPI000192598E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 1.208e-08
Internal
sp_v3.0_unigene150656 SustainPine v3.0 266
• AutoFact: RING-box protein 1 n=5 Tax=leotiomyceta RepID=A7E405_SCLS1 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-box protein 1a 8.757e-17
C-terminus
sp_v3.0_unigene150780 SustainPine v3.0 392
• AutoFact: PREDICTED: similar to Chain A, Ubiquitin-Conjugating Enzyme Hspc150, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015554AA 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 4.198e-07
Putative C-terminus
sp_v3.0_unigene151133 SustainPine v3.0 397
• AutoFact: Ubiquitin carrier protein n=2 Tax=Bacillariophyta RepID=B7G7K7_PHATC 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene151232 SustainPine v3.0 493
• AutoFact: Autophagy-related protein 8 n=49 Tax=leotiomyceta RepID=ATG8_MAGO7 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Autophagy-related protein 8 1.006e-16
Complete
sp_v3.0_unigene151281 SustainPine v3.0 401
• AutoFact: Ubiquitin-fold modifier 1, putative n=1 Tax=Schistosoma mansoni RepID=C4QLP6_SCHMA 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Probable ubiquitin-fold modifier 1 4.972e-19
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain