Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene123678 SustainPine v3.0 175
• AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 3.0e-14
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 6.584e-09
Internal
sp_v3.0_unigene126753 SustainPine v3.0 1030
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.756e-06
Putative Complete
sp_v3.0_unigene126783 SustainPine v3.0 493
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 3.817e-10
Internal
sp_v3.0_unigene126868 SustainPine v3.0 483
• AutoFact: Ubiquitin carrier protein n=1 Tax=Yarrowia lipolytica CLIB122 RepID=Q6C907_YARLI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene126884 SustainPine v3.0 546
• AutoFact: HECT domain-containing protein-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZFW5_PICSI 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative HECT ubiquitin-protein ligase 3 1.165e-08
Putative C-terminus
sp_v3.0_unigene127061 SustainPine v3.0 672
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 8.605e-11
Internal
sp_v3.0_unigene127260 SustainPine v3.0 592
• AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9T786_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene127325 SustainPine v3.0 1791
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
• Sma3: TIR1-like protein 7.744e-20
C-terminus
sp_v3.0_unigene127411 SustainPine v3.0 867
• AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative Complete
sp_v3.0_unigene127550 SustainPine v3.0 759
• AutoFact: Peroxiredoxin n=4 Tax=Papilionoideae RepID=B3GV28_PEA 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peroxiredoxin 1.511e-15
Putative Complete
sp_v3.0_unigene127879 SustainPine v3.0 1059
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LR70_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 8.925e-17
Complete
sp_v3.0_unigene127896 SustainPine v3.0 925
• AutoFact: Ubiquitin carrier protein n=1 Tax=Populus trichocarpa RepID=B9HDK6_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene128189 SustainPine v3.0 442
• AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR0_HYAOR 7.0e-32
• FL-Next: tr=Putative ubiquitin conjugating enzyme; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene128226 SustainPine v3.0 735
• AutoFact: Ubiquitin-conjugating enzyme 13, E2 n=3 Tax=Embryophyta RepID=D8QMV8_SELML 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
Complete
sp_v3.0_unigene129172 SustainPine v3.0 320
• AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 8.085e-09
Internal
sp_v3.0_unigene129798 SustainPine v3.0 312
• AutoFact: Ubiquitin-conjugating enzyme E2 n=2 Tax=Pinaceae RepID=Q9ZRS7_PSEMZ 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.056e-17
C-terminus
sp_v3.0_unigene129868 SustainPine v3.0 238
• AutoFact: Probable ubiquitin-conjugating enzyme E2 n=3 Tax=Picea RepID=O65079_PICMA 1.0e-10
• FL-Next: tr=Probable ubiquitin-conjugating enzyme E2; Picea mariana (Black spruce) (Abies mariana). 0.0
Misassembled
sp_v3.0_unigene130091 SustainPine v3.0 440
• AutoFact: Autophagy-related protein 8f n=3 Tax=core eudicotyledons RepID=ATG8F_ARATH 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Gaba(A) receptor-associated protein, putative 3.752e-12
Putative Complete
sp_v3.0_unigene130209 SustainPine v3.0 668
• AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Selaginella moellendorffii RepID=D8T5S9_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
N-terminus
sp_v3.0_unigene130593 SustainPine v3.0 455
• AutoFact: Unassigned protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative NEP1-interacting protein 4.629e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain