Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene96442 SustainPine v3.0 464
• AutoFact: Unassigned protein
• FL-Next: sp=U-box domain-containing protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene97175 SustainPine v3.0 522
• AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 5.0e-14
• FL-Next: sp=Protein SPA1-RELATED 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene97240 SustainPine v3.0 478
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5ABW6_PICSI 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative N-terminus
sp_v3.0_unigene98464 SustainPine v3.0 411
• AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene99569 SustainPine v3.0 1007
• AutoFact: E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] ref|NP_001119465.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97324.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] gb|AED97328.1| E3 SUMO-protein ligase SIZ1 [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 2 of E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 0.0
Internal
sp_v3.0_unigene100853 SustainPine v3.0 898
• AutoFact: amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] gb|AEE27799.1| amyloid beta precursor protein binding protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: sp=NEDD8-activating enzyme E1 regulatory subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene101653 SustainPine v3.0 773
• AutoFact: anaphase-promoting complex subunit 10 [Arabidopsis thaliana] sp|Q9ZPW2.2|APC10_ARATH RecName: Full=Anaphase-promoting complex subunit 10; Short=APC10; AltName: Full=Cyclosome subunit 10 gb|AAD15507.2| expressed protein [Arabidopsis thaliana] gb|ABD94068.1 0.0
• FL-Next: sp=Anaphase-promoting complex subunit 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Anaphase-promoting complex subunit 10 1.34e-13
Complete
sp_v3.0_unigene102017 SustainPine v3.0 509
• AutoFact: Adenine nucleotide alpha hydrolase domain-containing protein kinase n=3 Tax=Arabidopsis RepID=Q1PF03_ARATH 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 1.003e-15
N-terminus
sp_v3.0_unigene102437 SustainPine v3.0 884
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 6.309e-08
Complete
sp_v3.0_unigene102477 SustainPine v3.0 789
• AutoFact: E3 ubiquitin-protein ligase KEG [Arabidopsis thaliana] sp|Q9FY48.2|KEG_ARATH RecName: Full=E3 ubiquitin-protein ligase KEG; AltName: Full=Protein KEEP ON GOING; AltName: Full=RING finger protein KEG gb|ABC46683.1| RING E3 ligase protein [Arabidopsis thali 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102480 SustainPine v3.0 1307
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974785.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAC01778.1| putative protein [Arabidopsis thaliana] gb|AAM98197.1| unknown protein [Arabidopsis thaliana] gb|AAP13 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RHB1A 3.208e-08
Complete
sp_v3.0_unigene102733 SustainPine v3.0 586
• AutoFact: E3 ubiquitin-protein ligase HOS1 [Arabidopsis thaliana] sp|Q84JU6.1|HOS1_ARATH RecName: Full=E3 ubiquitin-protein ligase HOS1; AltName: Full=Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1; AltName: Full=RING finger protein HOS1 gb|AAO42259.1| un 2.0e-37
• FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102870 SustainPine v3.0 743
• AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102957 SustainPine v3.0 363
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 9.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 8.431e-18
Internal
sp_v3.0_unigene103079 SustainPine v3.0 836
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene103572 SustainPine v3.0 720
• AutoFact: Ubiquitin-conjugating enzyme E2-23 kDa n=2 Tax=Triticeae RepID=UBC4_WHEAT 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.704e-26
C-terminus
sp_v3.0_unigene103704 SustainPine v3.0 388
• AutoFact: Protein SPA1-RELATED 4 n=2 Tax=Arabidopsis RepID=SPA4_ARATH 2.0e-26
• FL-Next: sp=Protein SPA1-RELATED 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene103920 SustainPine v3.0 317
• AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 5.0e-20
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104106 SustainPine v3.0 262
• AutoFact: Probable ubiquitin-conjugating enzyme E2 23 n=2 Tax=Arabidopsis RepID=UBC23_ARATH 5.0e-26
• FL-Next: sp=Probable ubiquitin-conjugating enzyme E2 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104618 SustainPine v3.0 422
• AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase PUB14, putative 1.297e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain