Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene67590 SustainPine v3.0 296
• AutoFact: ATP binding protein, putative (EC:2.7.10.2) 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 5.445e-08
Putative N-terminus
sp_v3.0_unigene68123 SustainPine v3.0 182
• AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 5.0e-22
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
• Sma3: TRANSPORT INHIBITOR RESPONSE 1 protein, putative 5.595e-08
Internal
sp_v3.0_unigene68134 SustainPine v3.0 268
• AutoFact: Unassigned protein
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene68186 SustainPine v3.0 128
• AutoFact: Ubiquitin-activating enzyme E1 n=1 Tax=Volvox carteri f. nagariensis RepID=D8TL95_VOLCA 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 1.802e-26
Internal
sp_v3.0_unigene68686 SustainPine v3.0 321
• AutoFact: putative RING zinc finger protein [Arabidopsis thaliana] 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 6.581e-06
Internal
sp_v3.0_unigene68930 SustainPine v3.0 132
• AutoFact: Ubiquitin carrier protein n=1 Tax=Populus trichocarpa RepID=B9HDK6_POPTR 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 3.08286e-44
C-terminus
sp_v3.0_unigene69142 SustainPine v3.0 247
• AutoFact: Ubiquitin-activating enzyme E1 n=1 Tax=Ricinus communis RepID=B9SKZ1_RICCO 1.0e-20
• FL-Next: sp=Ubiquitin-activating enzyme E1 2; Triticum aestivum (Wheat). 0.0
• Sma3: Ubiquitin-activating enzyme E1 3.72e-36
Internal
sp_v3.0_unigene69260 SustainPine v3.0 293
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LR70_PICSI 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 4.718e-13
Putative N-terminus
sp_v3.0_unigene69330 SustainPine v3.0 209
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAK82555.1| AT5g41350/MYC6_6 [Arabidopsis thaliana] gb|AAN28767.1| At5g41350/MYC6_6 [Arabidopsis thaliana] gb|AED94668.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene70136 SustainPine v3.0 332
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5ABW6_PICSI 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.991e-22
C-terminus
sp_v3.0_unigene70169 SustainPine v3.0 426
• AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene71134 SustainPine v3.0 158
• AutoFact: Autophagy 8h n=1 Tax=Solanum lycopersicum RepID=F2YHL2_SOLLC 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene71512 SustainPine v3.0 340
• AutoFact: Ubiquitin-conjugating enzyme E2-23 kDa n=2 Tax=Triticeae RepID=UBC4_WHEAT 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.25e-27
Putative C-terminus
sp_v3.0_unigene72292 SustainPine v3.0 304
• AutoFact: Ubiquitin-conjugating enzyme E2-23 kDa n=2 Tax=Triticeae RepID=UBC4_WHEAT 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.25e-27
Putative C-terminus
sp_v3.0_unigene72414 SustainPine v3.0 278
• AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 3.0e-31
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene73096 SustainPine v3.0 273
• AutoFact: similar to eukaryotic protein kinase domains (Pfam: pkinase.hmm, score: 171.43) [Arabidopsis thaliana] 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 6.094e-16
Internal
sp_v3.0_unigene73326 SustainPine v3.0 245
• AutoFact: anaphase-promoting complex subunit 10 [Arabidopsis thaliana] sp|Q9ZPW2.2|APC10_ARATH RecName: Full=Anaphase-promoting complex subunit 10; Short=APC10; AltName: Full=Cyclosome subunit 10 gb|AAD15507.2| expressed protein [Arabidopsis thaliana] gb|ABD94068.1 4.0e-18
• FL-Next: sp=Anaphase-promoting complex subunit 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Anaphase-promoting complex subunit 10 2.194e-09
Putative C-terminus
sp_v3.0_unigene73690 SustainPine v3.0 342
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74055 SustainPine v3.0 267
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LMJ5_PICSI 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.4013e-45
Internal
sp_v3.0_unigene74108 SustainPine v3.0 360
• AutoFact: Atg8 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Autophagy-related protein 8 1.457e-16
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain