Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene53620 SustainPine v3.0 214
• AutoFact: ankyrin-repeat containing protein [Arabidopsis thaliana] 4.0e-23
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene53621 SustainPine v3.0 252
• AutoFact: Immediate-early fungal elicitor protein CMPG1 (Fragment) n=1 Tax=Petroselinum crispum RepID=Q94G57_PETCR 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr8 scaffold_99, whole genome shotgun sequence 8.334e-08
N-terminus
sp_v3.0_unigene53691 SustainPine v3.0 424
• AutoFact: ubiquitin activating enzyme E1 [Cicer arietinum] 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-activating enzyme E1 7.84727e-44
C-terminus
sp_v3.0_unigene53717 SustainPine v3.0 424
• AutoFact: Putative RING zinc finger protein [Oryza sativa Japonica Group] 2.0e-27
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene54253 SustainPine v3.0 463
• AutoFact: DNA damage-binding protein 1 n=5 Tax=core eudicotyledons RepID=DDB1_SOLCE 0.0
• FL-Next: sp=DNA damage-binding protein 1; cheesmanii). 0.0
Internal
sp_v3.0_unigene54526 SustainPine v3.0 244
• AutoFact: Ubiquitin-conjugating enzyme E2 35 n=42 Tax=Embryophyta RepID=UBC35_ARATH 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Internal
sp_v3.0_unigene54721 SustainPine v3.0 147
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein ATL5A 3.05e-15
Internal
sp_v3.0_unigene55099 SustainPine v3.0 340
• AutoFact: pfam04110, APG12, Ubiquitin-like autophagy protein Apg12 2.0e-09
• FL-Next: sp=Ubiquitin-like protein ATG12; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Putative Complete
sp_v3.0_unigene55325 SustainPine v3.0 165
• AutoFact: Ubiquitin carrier protein n=1 Tax=Sorghum bicolor RepID=C5YK67_SORBI 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Internal
sp_v3.0_unigene56466 SustainPine v3.0 270
• AutoFact: Ubiquitin-activating enzyme E1 n=2 Tax=Populus trichocarpa RepID=B9GGR5_POPTR 2.0e-34
• FL-Next: sp=Ubiquitin-activating enzyme E1 2; Triticum aestivum (Wheat). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
Internal
sp_v3.0_unigene56756 SustainPine v3.0 318
• AutoFact: Putative RING zinc finger protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8S5X9_ORYSJ 2.0e-20
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene57020 SustainPine v3.0 390
• AutoFact: 5-AMP-activated protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SVJ9_RICCO 1.0e-19
• FL-Next: Isoform 2 of SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 0.0
• Sma3: SNF1-related protein kinase 1.356e-18
N-terminus
sp_v3.0_unigene57242 SustainPine v3.0 377
• AutoFact: 5-AMP-activated protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SVJ9_RICCO 1.0e-18
• FL-Next: Isoform 2 of SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 0.0
• Sma3: SNF1-related protein kinase 1.356e-18
N-terminus
sp_v3.0_unigene57566 SustainPine v3.0 260
• AutoFact: photoregulatory zinc-finger protein COP1 [Rosa hybrid cultivar] 9.0e-24
• FL-Next: sp=E3 ubiquitin-protein ligase COP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: COP1 6.811e-11
Internal
sp_v3.0_unigene57900 SustainPine v3.0 255
• AutoFact: Cell division control 20 n=1 Tax=Solanum lycopersicum var. cerasiforme RepID=D2U579_SOLLC 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cdc20 protein 1.382e-07
Internal
sp_v3.0_unigene58140 SustainPine v3.0 225
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LMJ5_PICSI 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.14906e-43
C-terminus
sp_v3.0_unigene58141 SustainPine v3.0 109
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKP2_PICSI 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.752e-17
Putative C-terminus
sp_v3.0_unigene58692 SustainPine v3.0 324
• AutoFact: PREDICTED: RING-box protein 1-like isoform 2 n=2 Tax=Hominidae RepID=UPI0001D61988 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-box protein 1a 9.865e-17
Putative N-terminus
sp_v3.0_unigene58896 SustainPine v3.0 376
• AutoFact: RING-H2 finger protein ATL74 [Arabidopsis thaliana] sp|Q9LZV8.1|ATL74_ARATH RecName: Full=RING-H2 finger protein ATL74 emb|CAB82758.1| putative protein [Arabidopsis thaliana] gb|AAR20739.1| At5g01880 [Arabidopsis thaliana] gb|AAR24751.1| At5g01880 [Arabid 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59715 SustainPine v3.0 210
• AutoFact: KEG; KEG (KEEP ON GOING); protein binding / protein kinase/ ubiquitin-protein ligase 4.0e-09
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain