Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: modification-dependent protein catabolic process

Term: GO:0019941  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene35986 SustainPine v3.0 756
• AutoFact: arm repeat protein [Oryza sativa Japonica Group] 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene36347 SustainPine v3.0 1297
• AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin-like protein 5 1.427e-08
Complete
sp_v3.0_unigene36518 SustainPine v3.0 909
• AutoFact: Ubiquitin-like protein ATG12 n=4 Tax=rosids RepID=ATG12_MEDTR 7.0e-37
• FL-Next: sp=Ubiquitin-like protein ATG12; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Putative autophagy-related protein 12 0.0
Complete
sp_v3.0_unigene37105 SustainPine v3.0 292
• AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 6.0e-28
• FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 5.891e-09
Internal
sp_v3.0_unigene37556 SustainPine v3.0 2187
• AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RC56_RICCO 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cleavage and polyadenylation specificity factor, putative 6.45e-11
Complete
sp_v3.0_unigene38820 SustainPine v3.0 558
• AutoFact: E3 ubiquitin-protein ligase BAH1 [Arabidopsis thaliana] sp|Q9SRX9.1|BAH1_ARATH RecName: Full=E3 ubiquitin-protein ligase BAH1; AltName: Full=Protein BENZOIC ACID HYPERSENSITIVE 1; AltName: Full=Protein NITROGEN LIMITATION ADAPTATION gb|AAF02879.1|AC009525 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene42350 SustainPine v3.0 929
• AutoFact: cell division cycle 20, cofactor of APC complex [Arabidopsis thaliana] emb|CAB38785.1| WD-repeat protein-like protein [Arabidopsis thaliana] emb|CAB80044.1| WD-repeat protein-like protein [Arabidopsis thaliana] gb|ABG48494.1| At4g33270 [Arabidopsis thalia 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle, putative 1.137e-09
C-terminus
sp_v3.0_unigene42360 SustainPine v3.0 1551
• AutoFact: E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana] sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL42; AltName: Full=RING-H2 finger protein ATL42; Flags: Precursor emb|CAB43903.1| putative protein [Arabidopsis thaliana] emb|CAB8 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 5.968e-06
Complete
sp_v3.0_unigene42679 SustainPine v3.0 563
• AutoFact: Ubiquitin-activating enzyme E1 (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQU6_VITVI 0.0
• FL-Next: sp=Ubiquitin-activating enzyme E1 1; Triticum aestivum (Wheat). 0.0
• Sma3: Ubiquitin-activating enzyme E1 0.0
Internal
sp_v3.0_unigene43090 SustainPine v3.0 591
• AutoFact: PREDICTED: similar to zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Vitis vinifera RepID=UPI0001982E83 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ring finger protein, putative 8.156e-17
Internal
sp_v3.0_unigene43848 SustainPine v3.0 143
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene43930 SustainPine v3.0 875
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RT88_RICCO 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene44084 SustainPine v3.0 1468
• AutoFact: putative protein kinase [Arabidopsis thaliana] 7.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene44186 SustainPine v3.0 753
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 8.985e-15
N-terminus
sp_v3.0_unigene44800 SustainPine v3.0 267
• AutoFact: ubiquitin-protein ligase 2 [Arabidopsis thaliana] 3.0e-09
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: E3 ubiquitin protein ligase upl2, putative 3.983e-09
Internal
sp_v3.0_unigene45004 SustainPine v3.0 155
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9SUD5_RICCO 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene45444 SustainPine v3.0 375
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9S8E7_RICCO 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Spotted leaf protein, putative 4.595e-06
Internal
sp_v3.0_unigene45708 SustainPine v3.0 148
• AutoFact: Unassigned protein
• FL-Next: sp=Protein SUPPRESSOR OF PHYA-105 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin ligase protein cop1, putative 1.987e-11
Internal
sp_v3.0_unigene46177 SustainPine v3.0 447
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SQF9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase PUB14, putative 1.198e-09
Putative C-terminus
sp_v3.0_unigene46278 SustainPine v3.0 1513
• AutoFact: E3 ubiquitin-protein ligase ATL42 [Arabidopsis thaliana] sp|Q5XF85.2|ATL42_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL42; AltName: Full=RING-H2 finger protein ATL42; Flags: Precursor emb|CAB43903.1| putative protein [Arabidopsis thaliana] emb|CAB8 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain