Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA methylation

Term: GO:0006306  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene136916 SustainPine v3.0 287
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.241e-11
C-terminus
sp_v3.0_unigene137335 SustainPine v3.0 471
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene137362 SustainPine v3.0 350
• AutoFact: DYW8 protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q9M4P5_ARATH 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 6.625e-08
C-terminus
sp_v3.0_unigene137674 SustainPine v3.0 234
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 1.505e-14
C-terminus
sp_v3.0_unigene137784 SustainPine v3.0 369
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 9.286e-40
Internal
sp_v3.0_unigene137969 SustainPine v3.0 239
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Pilularia globulifera RepID=B3U1T7_9MONI 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene138031 SustainPine v3.0 404
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Pinus nigra RepID=B3U1V2_9CONI 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 3.719e-20
C-terminus
sp_v3.0_unigene138076 SustainPine v3.0 349
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.168e-11
C-terminus
sp_v3.0_unigene138145 SustainPine v3.0 442
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene138253 SustainPine v3.0 411
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene138454 SustainPine v3.0 188
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene138646 SustainPine v3.0 301
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 8.228e-14
C-terminus
sp_v3.0_unigene138959 SustainPine v3.0 274
• AutoFact: DNA (cytosine-5)-methyltransferase 1 n=3 Tax=Arabidopsis RepID=DNMT1_ARATH 3.0e-35
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene139013 SustainPine v3.0 336
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Putative C-terminus
sp_v3.0_unigene139178 SustainPine v3.0 497
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 2.117e-40
C-terminus
sp_v3.0_unigene139461 SustainPine v3.0 316
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene139773 SustainPine v3.0 490
• AutoFact: Domains rearranged methyltransferase n=3 Tax=Nicotiana RepID=B1GYI2_NICSY 3.0e-15
• FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: DNA methyltransferase 1.938e-10
C-terminus
sp_v3.0_unigene140443 SustainPine v3.0 486
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene140675 SustainPine v3.0 899
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 1.519e-35
C-terminus
sp_v3.0_unigene140732 SustainPine v3.0 547
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 1.126e-06
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain