|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene127592
|
SustainPine v3.0
|
1134
|
|
• AutoFact: Polypyrimidine tract binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4F5_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Putative polypyrimidine tract-binding protein
|
1.397e-08
|
|
C-terminus
|
|
sp_v3.0_unigene128206
|
SustainPine v3.0
|
598
|
|
• AutoFact: Polypyrimidine tract-binding protein homolog 3 n=4 Tax=Arabidopsis RepID=PTBP3_ARATH
|
7.0e-34
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
N-terminus
|
|
sp_v3.0_unigene128251
|
SustainPine v3.0
|
585
|
|
• AutoFact: Arginine/serine-rich splicing factor RSP41, putative [Solanum demissum]
|
5.0e-27
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Arginine/serine-rich splicing factor RSP41
|
1.538e-16
|
|
N-terminus
|
|
sp_v3.0_unigene128936
|
SustainPine v3.0
|
642
|
|
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFR2_PHYPA
|
2.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Arginine/serine-rich splicing factor, putative
|
5.451e-14
|
|
C-terminus
|
|
sp_v3.0_unigene130124
|
SustainPine v3.0
|
537
|
|
• AutoFact: CRM family member 2 [Arabidopsis thaliana] gb|AAM97013.1| unknown protein [Arabidopsis thaliana] gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana] gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana]
|
2.99878e-43
|
|
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize).
|
0.0
|
|
• Sma3: Protein CHLOROPLAST RNA SPLICING 1
|
1.483e-12
|
|
Internal
|
|
sp_v3.0_unigene131190
|
SustainPine v3.0
|
602
|
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene131364
|
SustainPine v3.0
|
362
|
|
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO
|
1.00053e-42
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene131612
|
SustainPine v3.0
|
530
|
|
• AutoFact: U2 auxiliary factor small subunit [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: U2 snrnp auxiliary factor, small subunit, putative
|
2.089e-11
|
|
Putative N-terminus
|
|
sp_v3.0_unigene132428
|
SustainPine v3.0
|
334
|
|
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI
|
2.0e-34
|
|
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Peptidyl-prolyl cis-trans isomerase
|
0.0
|
|
N-terminus
|
|
sp_v3.0_unigene132762
|
SustainPine v3.0
|
417
|
|
• AutoFact: PREDICTED: similar to maturase-like protein n=1 Tax=Vitis vinifera RepID=UPI0001983DB6
|
7.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Sma3: Os06g0659200 protein
|
6.335e-06
|
|
C-terminus
|
|
sp_v3.0_unigene133600
|
SustainPine v3.0
|
224
|
|
• AutoFact: cytochrome oxidase subunit 2 [Pinus sylvestris]
|
4.0e-10
|
|
• FL-Next: sp=Cytochrome c oxidase subunit 2; Beta vulgaris (Sugar beet). Mitochondrion.
|
0.0
|
|
• Sma3: Cytochrome c oxidase subunit 2
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene133850
|
SustainPine v3.0
|
475
|
|
• AutoFact: alternative splicing regulator [Triticum aestivum]
|
4.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Putative transformer-SR ribonucleoprotein
|
2.7e-12
|
|
Putative N-terminus
|
|
sp_v3.0_unigene134597
|
SustainPine v3.0
|
241
|
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
6.0e-15
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene134896
|
SustainPine v3.0
|
270
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: RNA binding protein, putative
|
4.484e-06
|
|
Internal
|
|
sp_v3.0_unigene136190
|
SustainPine v3.0
|
226
|
|
• AutoFact: CRM family member 2 [Arabidopsis thaliana] gb|AAM97013.1| unknown protein [Arabidopsis thaliana] gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana] gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana]
|
2.0e-23
|
|
• FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Protein CHLOROPLAST RNA SPLICING 1
|
1.445e-12
|
|
Internal
|
|
sp_v3.0_unigene138323
|
SustainPine v3.0
|
222
|
|
• AutoFact: putative small nuclear ribonucleoprotein Prp4p [Arabidopsis thaliana] dbj|BAF01385.1| putative U4/U6 small nuclear ribonucleoprotein [Arabidopsis thaliana]
|
6.0e-07
|
|
• FL-Next: sp=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene138934
|
SustainPine v3.0
|
403
|
|
• AutoFact: Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=2 Tax=Arabidopsis thaliana RepID=Q8VY00_ARATH
|
7.0e-34
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Putative pre-mRNA splicing factor RNA helicase
|
7.997e-09
|
|
Internal
|
|
sp_v3.0_unigene140437
|
SustainPine v3.0
|
1020
|
|
• AutoFact: Putative U2 snRNP auxiliary factor (Fragment) n=1 Tax=Chenopodium rubrum RepID=Q1H8Q9_CHERU
|
9.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Splicing factor U2af 38 kDa subunit
|
2.9e-08
|
|
Internal
|
|
sp_v3.0_unigene140506
|
SustainPine v3.0
|
854
|
|
• AutoFact: DUF1777 multi-domain protein
|
3.0e-09
|
|
• FL-Next: sp=Serine/arginine-rich splicing factor RSZ23; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Sma3: Splicing factor, arginine/serine-rich 7
|
5.103e-15
|
|
C-terminus
|
|
sp_v3.0_unigene140877
|
SustainPine v3.0
|
554
|
|
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NK21_PICSI
|
0.0
|
|
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Sma3: Peptidyl-prolyl cis-trans isomerase
|
0.0
|
|
Misassembled
|
