Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene231 SustainPine v3.0 1770
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
C-terminus
sp_v3.0_unigene704 SustainPine v3.0 2043
AutoFact: No apical meristem (NAM) protein n=1 Tax=Medicago truncatula RepID=A2Q3I9_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene1199 SustainPine v3.0 1120
AutoFact: Ch-cobra n=1 Tax=Cunninghamia lanceolata RepID=B7S746_CUNLA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein COBRA, putative 2.89e-17
C-terminus
sp_v3.0_unigene1258 SustainPine v3.0 3690
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene2201 SustainPine v3.0 1432
AutoFact: R2R3-MYB transcription factor MYB4 n=1 Tax=Picea glauca RepID=A5JYE8_PICGL 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 2.806e-34
Complete
sp_v3.0_unigene3365 SustainPine v3.0 843
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene3464 SustainPine v3.0 2020
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Complete
sp_v3.0_unigene3935 SustainPine v3.0 4389
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene4654 SustainPine v3.0 259
AutoFact: R2R3-MYB transcription factor MYB4 n=1 Tax=Picea glauca RepID=A5JYE8_PICGL 6.0e-23
FL-Next: tr=R2R3-MYB transcription factor MYB4; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 8.799e-25
N-terminus
sp_v3.0_unigene5051 SustainPine v3.0 889
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene7178 SustainPine v3.0 1269
AutoFact: dehydration-responsive element-binding protein 3 [Arabidopsis thaliana] sp|Q9LYD3.1|DREB3_ARATH RecName: Full=Dehydration-responsive element-binding protein 3; AltName: Full=Protein TINY 2 emb|CAB87719.1| transcription factor like protein [Arabidopsis tha 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 3.809e-28
Complete
sp_v3.0_unigene7437 SustainPine v3.0 766
AutoFact: Ch-cobra n=1 Tax=Cunninghamia lanceolata RepID=B7S746_CUNLA 0.0
FL-Next: tr=Ch-cobra; Cunninghamia lanceolata (China fir). 0.0
Sma3: Protein COBRA, putative 3.5e-17
Internal
sp_v3.0_unigene7585 SustainPine v3.0 1402
AutoFact: Drought responsive element binding protein 2 n=3 Tax=Glycine max RepID=C5IU97_SOYBN 1.0e-30
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Putative C-terminus
sp_v3.0_unigene9494 SustainPine v3.0 645
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 2.0e-33
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 1.26117e-44
C-terminus
sp_v3.0_unigene10578 SustainPine v3.0 3522
AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Complete
sp_v3.0_unigene10872 SustainPine v3.0 762
AutoFact: putative AP2 domain transcription factor [Arabidopsis thaliana] 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TINY-like protein 4.48e-27
C-terminus
sp_v3.0_unigene10902 SustainPine v3.0 515
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI1_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene11185 SustainPine v3.0 574
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L117_MALDO 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 1.857e-37
Putative C-terminus
sp_v3.0_unigene11662 SustainPine v3.0 1186
AutoFact: putative AP2/EREBP transcription factor [Arabidopsis thaliana] 2.0e-16
FL-Next: sp=Ethylene-responsive transcription factor ABI4; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: AP2/ERF domain-containing transcription factor 7.199e-28
Complete
sp_v3.0_unigene12366 SustainPine v3.0 1916
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain