Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene161276 SustainPine v3.0 452
AutoFact: Cellulose synthase-like protein D1 n=2 Tax=Oryza sativa RepID=CSLD1_ORYSJ 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Sma3: Cellulose synthase 0.0
Internal
sp_v3.0_unigene162535 SustainPine v3.0 372
AutoFact: laccase [Pinus taeda] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene163246 SustainPine v3.0 192
AutoFact: AP2 domain-containing transcription factor 1 n=3 Tax=Glycine max RepID=C9WA59_SOYBN 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene164401 SustainPine v3.0 177
AutoFact: NAC secondary wall thickening promoting factor 1 n=1 Tax=Medicago truncatula RepID=D8WJD8_MEDTR 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene164943 SustainPine v3.0 368
AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 5.18e-40
Internal
sp_v3.0_unigene166421 SustainPine v3.0 434
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene166556 SustainPine v3.0 223
AutoFact: Transcription factor AP2 n=1 Tax=Taxus cuspidata RepID=B2CSN5_TAXCU 3.0e-15
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
Internal
sp_v3.0_unigene183088 SustainPine v3.0 825
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI0_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 0.0
Internal
sp_v3.0_unigene184547 SustainPine v3.0 486
AutoFact: Laccase n=4 Tax=Populus trichocarpa RepID=B9HHK7_POPTR 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 7.00649e-45
C-terminus
sp_v3.0_unigene184636 SustainPine v3.0 546
AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 7.00649e-45
C-terminus
sp_v3.0_unigene187536 SustainPine v3.0 359
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RRY3_RICCO 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TINY-like protein 3.059e-26
Internal
sp_v3.0_unigene189488 SustainPine v3.0 834
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI6_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene195506 SustainPine v3.0 302
AutoFact: Transcription factor n=1 Tax=Solanum lycopersicum RepID=Q43524_SOLLC 1.0e-16
FL-Next: tr=R2R3-MYB transcription factor MYB2; Pinus taeda (Loblolly pine). 0.0
Sma3: R2R3-MYB transcription factor MYB8 3.26e-08
Internal
sp_v3.0_unigene196306 SustainPine v3.0 490
AutoFact: Laccase, putative n=1 Tax=Ricinus communis RepID=B9T6M5_RICCO 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 1.82169e-44
C-terminus
sp_v3.0_unigene200616 SustainPine v3.0 399
AutoFact: RecName: Full=Putative laccase-17; AltName: Full=Benzenediol:oxygen oxidoreductase 17; AltName: Full=Diphenol oxidase 17; AltName: Full=Urishiol oxidase 17; Flags: Precursor gb|ABA91124.1| laccase, putative [Oryza sativa Japonica Group] gb|EAZ17158.1| hyp 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase 9.262e-38
C-terminus
sp_v3.0_unigene202053 SustainPine v3.0 1001
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene202649 SustainPine v3.0 535
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI4_PINTA 5.60519e-45
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 2.8026e-45
C-terminus
sp_v3.0_unigene202876 SustainPine v3.0 589
AutoFact: AP2 domain containing protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 4.956e-31
N-terminus
sp_v3.0_unigene203015 SustainPine v3.0 422
AutoFact: Dehydration-responsive element-binding protein 1B n=1 Tax=Zea mays RepID=B6TYW5_MAIZE 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AP2/ERF domain-containing transcription factor 0.0
N-terminus
sp_v3.0_unigene207847 SustainPine v3.0 454
AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain