Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: plastid chromosome

Term: GO:0009508  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene104120 SustainPine v3.0 331
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene104719 SustainPine v3.0 568
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 5.0e-39
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene105909 SustainPine v3.0 740
AutoFact: plastid transcriptionally active 14 protein [Arabidopsis thaliana] gb|AAO42203.1| unknown protein [Arabidopsis thaliana] gb|AAO63895.1| unknown protein [Arabidopsis thaliana] dbj|BAF02014.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84278.1| plast 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene105972 SustainPine v3.0 556
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene123887 SustainPine v3.0 537
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene144544 SustainPine v3.0 536
AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene164235 SustainPine v3.0 356
AutoFact: plastid transcriptionally active 13 [Arabidopsis thaliana] gb|AAK83588.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AAM91077.1| AT3g09210/F3L24_8 [Arabidopsis thaliana] gb|AEE74738.1| plastid transcriptionally active 13 [Arabidopsis thaliana] 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain