Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: megagametogenesis

Term: GO:0009561  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene101913 SustainPine v3.0 647
• AutoFact: Cytohesin 1, 2, 3, putative n=1 Tax=Ricinus communis RepID=B9RDE3_RICCO 0.0
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 1.467e-08
Internal
sp_v3.0_unigene103575 SustainPine v3.0 359
• AutoFact: cohesin-like protein [Oryza sativa Indica Group] gb|EEC71958.1| hypothetical protein OsI_04789 [Oryza sativa Indica Group] 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cohesin subunit rad21, putative 9.837e-09
N-terminus
sp_v3.0_unigene105544 SustainPine v3.0 217
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 2.169e-08
Internal
sp_v3.0_unigene105968 SustainPine v3.0 401
• AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene107819 SustainPine v3.0 326
• AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 3.0e-35
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 3.549e-12
Internal
sp_v3.0_unigene112405 SustainPine v3.0 461
• AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene123479 SustainPine v3.0 459
• AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 1.406e-08
Internal
sp_v3.0_unigene127235 SustainPine v3.0 820
• AutoFact: Probable U3 small nucleolar RNA-associated protein 11 n=2 Tax=Arabidopsis RepID=UTP11_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: U3 snoRNA-associated protein 11 1.616e-09
Complete
sp_v3.0_unigene128375 SustainPine v3.0 384
• AutoFact: Phosphoglycerate dehydrogenase - like protein [Arabidopsis thaliana] 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: D-3-phosphoglycerate dehydrogenase, putative 6.501e-11
C-terminus
sp_v3.0_unigene128512 SustainPine v3.0 431
• AutoFact: pfam12678, zf-rbx1, RING-H2 zinc finger 8.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein RHF2a, putative, expressed 9.669e-08
N-terminus
sp_v3.0_unigene129986 SustainPine v3.0 270
• AutoFact: Cytohesin 1, 2, 3, putative n=1 Tax=Ricinus communis RepID=B9RDE3_RICCO 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene135989 SustainPine v3.0 331
• AutoFact: D-3-phosphoglycerate dehydrogenase [Arabidopsis thaliana] emb|CAA17552.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana] emb|CAB80137.1| Phosphoglycerate dehydrogenase-like protein [Arabidopsis thaliana] gb|AAL36166.1| putative phospho 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: D-3-phosphoglycerate dehydrogenase 1.792e-14
Internal
sp_v3.0_unigene141436 SustainPine v3.0 558
• AutoFact: D-3-phosphoglycerate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9RYA3_RICCO 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoglycerate dehydrogenase 2.725e-11
Misassembled
sp_v3.0_unigene141581 SustainPine v3.0 328
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDM6_RICCO 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RING-H2 finger protein RHF2a, putative, expressed 2.103e-08
N-terminus
sp_v3.0_unigene153039 SustainPine v3.0 267
• AutoFact: guanine nucleotide-exchange protein GEP2 [Oryza sativa] 4.0e-23
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 1.83e-12
Internal
sp_v3.0_unigene164189 SustainPine v3.0 385
• AutoFact: Exostosin domain containing protein 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Exostosin-like 1.38e-13
Internal
sp_v3.0_unigene164757 SustainPine v3.0 195
• AutoFact: exostosin-like protein [Arabidopsis thaliana] gb|AAF03467.1|AC009327_6 hypothetical protein [Arabidopsis thaliana] gb|AAP21279.1| At3g03650 [Arabidopsis thaliana] dbj|BAF00242.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73967.1| exostosin-like pr 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Secondary cell wall-related glycosyltransferase family 47 1.896e-07
Internal
sp_v3.0_unigene168218 SustainPine v3.0 160
• AutoFact: Sec7 domain containing protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 1.213e-08
Internal
sp_v3.0_unigene185136 SustainPine v3.0 360
• AutoFact: Cytohesin 1, 2, 3, putative n=1 Tax=Ricinus communis RepID=B9RDE3_RICCO 0.0
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 1.119e-11
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain