Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: xylem and phloem pattern formation

Term: GO:0010051  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene73746 SustainPine v3.0 370
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 2.0e-30
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.703e-09
Internal
sp_v3.0_unigene73937 SustainPine v3.0 367
• AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 6.0e-34
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 2.282e-09
Internal
sp_v3.0_unigene74126 SustainPine v3.0 340
• AutoFact: Topless-related protein 1 [Arabidopsis thaliana] gb|AEE36411.1| Topless-related protein 1 [Arabidopsis thaliana] 2.0e-31
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 7.378e-10
Internal
sp_v3.0_unigene74351 SustainPine v3.0 413
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Progesterone 5-beta-reductase, putative 1.679e-08
Internal
sp_v3.0_unigene75875 SustainPine v3.0 397
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene76112 SustainPine v3.0 288
• AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] sp|Q8L5Y6.1|CAND1_ARATH RecName: Full=Cullin-associated NEDD8-dissociated protein 1; AltName: Full=Cullin-associated and neddylation-dissociated protein 1; Short=AtCAND1; AltName: Full=P 2.0e-23
• FL-Next: Isoform 2 of Cullin-associated NEDD8-dissociated protein 1 OS=Arabidopsis thaliana GN=CAND1 0.0
Internal
sp_v3.0_unigene76278 SustainPine v3.0 259
• AutoFact: Unassigned protein
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 5.211e-12
Internal
sp_v3.0_unigene76464 SustainPine v3.0 290
• AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 4.0e-16
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.816e-09
Internal
sp_v3.0_unigene76662 SustainPine v3.0 238
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 5.698e-12
Internal
sp_v3.0_unigene77826 SustainPine v3.0 227
• AutoFact: Unassigned protein
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 2.6e-07
Internal
sp_v3.0_unigene77990 SustainPine v3.0 319
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 8.705e-12
Internal
sp_v3.0_unigene78306 SustainPine v3.0 265
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene78650 SustainPine v3.0 285
• AutoFact: VpsA protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NHB0_COPC7 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dynamin, putative 1.848e-24
Internal
sp_v3.0_unigene78776 SustainPine v3.0 145
• AutoFact: ADP-ribosylation factor GTPase-activating protein AGD3 [Arabidopsis thaliana] sp|Q5W7F2.1|AGD3_ARATH RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD3; Short=ARF GAP AGD3; AltName: Full=Protein ARF-GAP DOMAIN 3; Short=AtAGD3; AltName: F 5.0e-17
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene78979 SustainPine v3.0 281
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RVD2_RICCO 4.0e-12
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene81186 SustainPine v3.0 215
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 8.357e-12
Internal
sp_v3.0_unigene81232 SustainPine v3.0 228
• AutoFact: Homeobox_KN multi-domain protein 5.0e-19
• FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
• Sma3: Bel1 homeotic protein, putative 9.348e-28
Putative C-terminus
sp_v3.0_unigene81645 SustainPine v3.0 230
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 5.0e-22
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-40 repeat protein-like 1.374e-06
Internal
sp_v3.0_unigene93953 SustainPine v3.0 486
• AutoFact: ADP-ribosylation factor GTPase-activating protein AGD3 [Arabidopsis thaliana] sp|Q5W7F2.1|AGD3_ARATH RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD3; Short=ARF GAP AGD3; AltName: Full=Protein ARF-GAP DOMAIN 3; Short=AtAGD3; AltName: F 0.0
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Gcn4-complementing protein, putative 2.852e-08
Internal
sp_v3.0_unigene94354 SustainPine v3.0 1254
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Progesterone 5-beta-reductase 8.211e-07
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain