Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: xylem and phloem pattern formation

Term: GO:0010051  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene66344 SustainPine v3.0 328
• AutoFact: putative ARF GTPase-activating domain-containing protein [Oryza sativa Japonica Group] 7.0e-10
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene66462 SustainPine v3.0 274
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 3.0e-09
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene66584 SustainPine v3.0 416
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 7.938e-12
Putative C-terminus
sp_v3.0_unigene66853 SustainPine v3.0 283
• AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q7XA22_SOLBU 6.0e-22
• FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 7.727e-08
Internal
sp_v3.0_unigene67411 SustainPine v3.0 269
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.242e-09
Internal
sp_v3.0_unigene67522 SustainPine v3.0 141
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.357e-09
N-terminus
sp_v3.0_unigene67632 SustainPine v3.0 295
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 2.0e-25
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.057e-09
Internal
sp_v3.0_unigene68089 SustainPine v3.0 270
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.397e-09
Internal
sp_v3.0_unigene69812 SustainPine v3.0 209
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.509e-09
Internal
sp_v3.0_unigene69964 SustainPine v3.0 402
• AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 3.0e-12
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 9.307e-08
Internal
sp_v3.0_unigene71287 SustainPine v3.0 330
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 8.705e-12
N-terminus
sp_v3.0_unigene71640 SustainPine v3.0 188
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFZ3_RICCO 3.0e-16
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Gcn4-complementing protein, putative 1.712e-08
Internal
sp_v3.0_unigene71885 SustainPine v3.0 399
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.134e-07
C-terminus
sp_v3.0_unigene72461 SustainPine v3.0 378
• AutoFact: putative GTP-binding protein [Oryza sativa Japonica Group] gb|ABF98531.1| Dynamin-related protein 1C, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01687.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC76063.1| hypothetical prote 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dynamin, putative 2.215e-17
C-terminus
sp_v3.0_unigene72506 SustainPine v3.0 159
• AutoFact: Auxin-induced protein 5 n=1 Tax=Pinus taeda RepID=Q7XYT2_PINTA 2.0e-19
• FL-Next: tr=Auxin-induced protein 5; Pinus taeda (Loblolly pine). 0.0
• Sma3: Aux/IAA protein 6.718e-30
Putative C-terminus
sp_v3.0_unigene72714 SustainPine v3.0 143
• AutoFact: Unassigned protein
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Gcn4-complementing protein, putative 1.455e-08
Internal
sp_v3.0_unigene72895 SustainPine v3.0 124
• AutoFact: Protein TOPLESS n=5 Tax=Arabidopsis RepID=TPL_ARATH 3.0e-07
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Internal
sp_v3.0_unigene73040 SustainPine v3.0 296
• AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 1.0e-24
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 4.805e-07
Internal
sp_v3.0_unigene73267 SustainPine v3.0 398
• AutoFact: Auxin efflux facilitator SlPIN2 n=1 Tax=Solanum lycopersicum RepID=E5KGD3_SOLLC 6.0e-22
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 1.197e-35
C-terminus
sp_v3.0_unigene73435 SustainPine v3.0 177
• AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] sp|Q8L5Y6.1|CAND1_ARATH RecName: Full=Cullin-associated NEDD8-dissociated protein 1; AltName: Full=Cullin-associated and neddylation-dissociated protein 1; Short=AtCAND1; AltName: Full=P 1.0e-09
• FL-Next: sp=Cullin-associated NEDD8-dissociated protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain