Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: xylem and phloem pattern formation

Term: GO:0010051  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene54263 SustainPine v3.0 262
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 8.0e-17
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.703e-09
Internal
sp_v3.0_unigene54542 SustainPine v3.0 164
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 9.0e-11
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.491e-07
Internal
sp_v3.0_unigene56263 SustainPine v3.0 360
• AutoFact: Class III homeodomain-leucine zipper protein C3HDZ1 n=1 Tax=Phaeoceros carolinianus RepID=Q20BM0_9EMBR 4.0e-32
• FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 1.536e-33
Internal
sp_v3.0_unigene57249 SustainPine v3.0 230
• AutoFact: Unassigned protein
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene57403 SustainPine v3.0 406
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 2.039e-09
N-terminus
sp_v3.0_unigene57496 SustainPine v3.0 301
• AutoFact: VEP1 , putative n=1 Tax=Medicago truncatula RepID=Q2HRK0_MEDTR 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative progesterone 5-beta-reductase 3.277e-12
Internal
sp_v3.0_unigene58056 SustainPine v3.0 297
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.509e-09
Internal
sp_v3.0_unigene59151 SustainPine v3.0 450
• AutoFact: Homeobox domain containing protein 5.0e-09
• FL-Next: tr=Class III homeodomain-leucine zipper protein C3HDZ1; Taxus globosa. 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ1 2.864e-33
Internal
sp_v3.0_unigene59188 SustainPine v3.0 376
• AutoFact: KANADI-like transcription factor FEATHERED [Ipomoea nil] dbj|BAE73188.1| KANADI-like transcription factor FEATHERED [Ipomoea nil] 5.0e-13
• FL-Next: sp=Probable transcription factor RL9; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: KANADI-like transcription factor FEATHERED 2.657e-08
Internal
sp_v3.0_unigene59400 SustainPine v3.0 168
• AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] sp|Q8L5Y6.1|CAND1_ARATH RecName: Full=Cullin-associated NEDD8-dissociated protein 1; AltName: Full=Cullin-associated and neddylation-dissociated protein 1; Short=AtCAND1; AltName: Full=P 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59532 SustainPine v3.0 287
• AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] gb|AAC18930.1| unknown protein [Arabidopsis thaliana] gb|AEC05596.1| cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] 4.0e-30
• FL-Next: Isoform 2 of Cullin-associated NEDD8-dissociated protein 1 OS=Arabidopsis thaliana GN=CAND1 0.0
N-terminus
sp_v3.0_unigene60568 SustainPine v3.0 429
• AutoFact: Unassigned protein
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.267e-07
Internal
sp_v3.0_unigene60977 SustainPine v3.0 136
• AutoFact: Dynamin-related protein 1B n=2 Tax=Arabidopsis RepID=DRP1B_ARATH 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dynamin, putative 2.258e-17
Internal
sp_v3.0_unigene61261 SustainPine v3.0 239
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative progesterone 5-beta-reductase 3.433e-12
Internal
sp_v3.0_unigene61455 SustainPine v3.0 307
• AutoFact: BEL1-like homeodomain protein 2 n=3 Tax=Arabidopsis RepID=BLH2_ARATH 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bel1 homeotic protein, putative 3.076e-24
Putative C-terminus
sp_v3.0_unigene62683 SustainPine v3.0 187
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein, putative 1.509e-09
Internal
sp_v3.0_unigene63549 SustainPine v3.0 177
• AutoFact: Unassigned protein
• FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Gcn4-complementing protein, putative 2.563e-08
Internal
sp_v3.0_unigene64417 SustainPine v3.0 145
• AutoFact: PIN-like auxin efflux carrier n=1 Tax=Picea abies RepID=B5TXD0_PICAB 9.0e-18
• FL-Next: tr=PIN-like auxin efflux carrier; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Auxin efflux carrier component 2.138e-25
Internal
sp_v3.0_unigene65038 SustainPine v3.0 226
• AutoFact: Unassigned protein
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 5.954e-12
Internal
sp_v3.0_unigene65804 SustainPine v3.0 113
• AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 8.0e-11
• FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
• Sma3: Class III homeodomain-leucine zipper protein C3HDZ2 2.857e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain