Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vegetative to reproductive phase transition of meristem

Term: GO:0010228  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene128888 SustainPine v3.0 431
• AutoFact: DNA binding / transcription factor [Arabidopsis thaliana] gb|AAO92055.1| hypothetical protein [Arabidopsis thaliana] gb|AAS09990.1| MYB transcription factor [Arabidopsis thaliana] gb|AAT69172.1| hypothetical protein At2g30420 [Arabidopsis thaliana] gb|ADC 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Triptychon and cpc, putative 1.283e-11
N-terminus
sp_v3.0_unigene129959 SustainPine v3.0 709
• AutoFact: BEL1-related homeotic protein 29 [Solanum tuberosum] 1.0e-28
• FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
• Sma3: Bel1 homeotic protein, putative 9.348e-28
Putative C-terminus
sp_v3.0_unigene130083 SustainPine v3.0 505
• AutoFact: JmjC domain containing protein 1.0e-14
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Jumonji domain protein 1.044e-19
Internal
sp_v3.0_unigene130949 SustainPine v3.0 250
• AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.511e-22
Internal
sp_v3.0_unigene137656 SustainPine v3.0 380
• AutoFact: squamosa promoter binding protein 3 [Physcomitrella patens] 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.882e-19
Putative N-terminus
sp_v3.0_unigene139787 SustainPine v3.0 464
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 3.0e-33
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
N-terminus
sp_v3.0_unigene146180 SustainPine v3.0 1024
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 1.0e-36
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene146440 SustainPine v3.0 438
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 6.0e-30
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative N-terminus
sp_v3.0_unigene147216 SustainPine v3.0 696
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 7.00005e-41
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Glycine-rich RNA-binding protein 0.0
Putative Complete
sp_v3.0_unigene149770 SustainPine v3.0 416
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene152234 SustainPine v3.0 362
• AutoFact: putative Glycine-rich protein 2 [Oryza sativa Japonica Group] dbj|BAD07599.1| putative Glycine-rich protein 2 [Oryza sativa Japonica Group] gb|EAZ21537.1| hypothetical protein OsJ_05164 [Oryza sativa Japonica Group] gb|ACD13288.1| cold shock domain protei 1.0e-17
• FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Cold-shock protein with RNA binding domain 4.714e-08
Putative N-terminus
sp_v3.0_unigene152637 SustainPine v3.0 506
• AutoFact: glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40] dbj|BAE56344.1| unnamed protein product [Aspergillus oryzae RIB40] 2.0e-17
• FL-Next: tr=Glycine-rich RNA-binding protein; Sequoia sempervirens (California redwood) (Taxodium sempervirens). 0.0
• Sma3: Glycine-rich RNA-binding protein 1.586e-36
N-terminus
sp_v3.0_unigene158509 SustainPine v3.0 371
• AutoFact: Probable protein arginine N-methyltransferase 6.1 n=2 Tax=Oryza sativa RepID=ANM61_ORYSJ 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein arginine N-methyltransferase 3.356e-23
Internal
sp_v3.0_unigene158922 SustainPine v3.0 264
• AutoFact: HNRNP arginine N-methyltransferase [Lodderomyces elongisporus NRRL YB-4239] gb|EDK47417.1| HNRNP arginine N-methyltransferase [Lodderomyces elongisporus NRRL YB-4239] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein arginine N-methyltransferase 8.153e-14
Internal
sp_v3.0_unigene160314 SustainPine v3.0 480
• AutoFact: jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] gb|AAT77780.1| early flowering 6 [Arabidopsis thaliana] gb|AED90717.1| jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] 2.0e-25
• FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene160630 SustainPine v3.0 371
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 1.54143e-44
C-terminus
sp_v3.0_unigene164979 SustainPine v3.0 216
• AutoFact: APETALA2-like protein 1 n=1 Tax=Pinus thunbergii RepID=Q76H95_PINTH 3.0e-20
• FL-Next: tr=APETALA2-like protein 1; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: APETALA2-like protein 8.812e-33
Internal
sp_v3.0_unigene168170 SustainPine v3.0 132
• AutoFact: CAF protein n=17 Tax=Camelineae RepID=Q56Y50_ARATH 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DsRNA-specific nuclease dicer and related ribonuclease 5.614e-08
Internal
sp_v3.0_unigene169019 SustainPine v3.0 271
• AutoFact: Gly_rich multi-domain protein 7.0e-17
• Sma3: Glycine-rich RNA-binding protein 2.56e-14
coding
sp_v3.0_unigene183088 SustainPine v3.0 825
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI0_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain