Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vegetative to reproductive phase transition of meristem

Term: GO:0010228  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene101152 SustainPine v3.0 847
• AutoFact: SBP-domain protein 6 [Physcomitrella patens] 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.414e-22
Putative Complete
sp_v3.0_unigene102598 SustainPine v3.0 1307
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene102643 SustainPine v3.0 966
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Squamosa promoter-binding protein, putative 1.511e-22
N-terminus
sp_v3.0_unigene103081 SustainPine v3.0 684
• AutoFact: laccase [Pinus taeda] 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene104291 SustainPine v3.0 506
• AutoFact: JmjC domain containing protein 7.0e-36
• FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Jumonji domain protein 4.055e-23
Internal
sp_v3.0_unigene104550 SustainPine v3.0 740
• AutoFact: jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] gb|AAT77780.1| early flowering 6 [Arabidopsis thaliana] gb|AED90717.1| jumonji/Zn finger-class transcription factor ELF6 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: JmjC domain containing protein, expressed 1.317e-07
Internal
sp_v3.0_unigene105016 SustainPine v3.0 507
• AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9SC13_RICCO 6.0e-31
• FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 0.0
• Sma3: Dicer-like 4 1.165e-08
N-terminus
sp_v3.0_unigene106666 SustainPine v3.0 574
• AutoFact: JmjC domain containing protein 7.0e-15
• FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene107908 SustainPine v3.0 588
• AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9HHX6_POPTR 4.00001e-40
• FL-Next: sp=Endoribonuclease Dicer homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Dicer-like protein 3.417e-20
N-terminus
sp_v3.0_unigene108820 SustainPine v3.0 486
• AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene109949 SustainPine v3.0 379
• AutoFact: Early flowering 6 n=4 Tax=Arabidopsis RepID=Q6BDA0_ARATH 4.0e-16
• FL-Next: sp=Probable lysine-specific demethylase ELF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Jumonji domain protein 3.448e-07
N-terminus
sp_v3.0_unigene112707 SustainPine v3.0 215
• AutoFact: Unassigned protein
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene114924 SustainPine v3.0 373
• AutoFact: RecName: Full=Endoribonuclease Dicer homolog 1; AltName: Full=Dicer-like protein 1; Short=OsDCL1 gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group] gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza 0.0
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DsRNA-specific nuclease dicer and related ribonuclease 5.009e-08
Internal
sp_v3.0_unigene116735 SustainPine v3.0 234
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene118367 SustainPine v3.0 379
• AutoFact: Laccase n=3 Tax=Pinus RepID=F4MKL7_PINPS 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene120627 SustainPine v3.0 455
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene122547 SustainPine v3.0 351
• AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9RQZ1_RICCO 3.0e-34
• FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Dicer-like protein 7.796e-10
Internal
sp_v3.0_unigene127054 SustainPine v3.0 200
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 7.0e-34
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene127259 SustainPine v3.0 887
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
C-terminus
sp_v3.0_unigene127304 SustainPine v3.0 1619
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain