Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: vegetative to reproductive phase transition of meristem

Term: GO:0010228  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene37860 SustainPine v3.0 809
• AutoFact: Chalcone synthase (Fragment) n=4 Tax=Pseudotsuga RepID=C6F7B7_PSEMZ 2.0e-18
• FL-Next: tr=Pinocembrin chalcone synthase; Pinus densiflora (Japanese red pine). 0.0
• Sma3: Glycine-rich RNA-binding protein 4.62428e-44
C-terminus
sp_v3.0_unigene49249 SustainPine v3.0 1048
• AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 0.0
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene50893 SustainPine v3.0 181
• AutoFact: dicer-like protein [Oryza sativa Indica Group] 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 4.387e-16
Internal
sp_v3.0_unigene52289 SustainPine v3.0 372
• AutoFact: Probable histone-arginine methyltransferase CARM1 n=3 Tax=Oryza sativa RepID=CARM1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein arginine N-methyltransferase 3.137e-07
Internal
sp_v3.0_unigene55671 SustainPine v3.0 241
• AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RAP0_RICCO 1.0e-23
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene56154 SustainPine v3.0 258
• AutoFact: CAF protein n=17 Tax=Camelineae RepID=Q56Y50_ARATH 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dicer-like protein 4.055e-16
Internal
sp_v3.0_unigene56280 SustainPine v3.0 404
• AutoFact: AGAMOUS homolog (Fragment) n=2 Tax=Liquidambar RepID=Q9XHM3_LIQST 9.0e-16
• FL-Next: tr=AGAMOUS; Taxus baccata (English yew). 0.0
• Sma3: AGAMOUS-like protein 2.327e-28
N-terminus
sp_v3.0_unigene58067 SustainPine v3.0 316
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 8.0e-33
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase 0.0
Putative C-terminus
sp_v3.0_unigene58285 SustainPine v3.0 412
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUI2_PINTA 0.0
• FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene59400 SustainPine v3.0 168
• AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] sp|Q8L5Y6.1|CAND1_ARATH RecName: Full=Cullin-associated NEDD8-dissociated protein 1; AltName: Full=Cullin-associated and neddylation-dissociated protein 1; Short=AtCAND1; AltName: Full=P 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59532 SustainPine v3.0 287
• AutoFact: cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] gb|AAC18930.1| unknown protein [Arabidopsis thaliana] gb|AEC05596.1| cullin-associated NEDD8-dissociated protein 1 [Arabidopsis thaliana] 4.0e-30
• FL-Next: Isoform 2 of Cullin-associated NEDD8-dissociated protein 1 OS=Arabidopsis thaliana GN=CAND1 0.0
N-terminus
sp_v3.0_unigene59625 SustainPine v3.0 211
• AutoFact: APETALA2-like protein 2 n=1 Tax=Pinus thunbergii RepID=Q76H94_PINTH 2.0e-09
• FL-Next: tr=APETALA2-like protein 2; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: APETALA2-like protein 1.907e-28
Internal
sp_v3.0_unigene60453 SustainPine v3.0 172
• AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial n=1 Tax=Medicago truncatula RepID=Q2HTA7_MEDTR 4.0e-19
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Dicer-like protein 3.455e-10
Internal
sp_v3.0_unigene61455 SustainPine v3.0 307
• AutoFact: BEL1-like homeodomain protein 2 n=3 Tax=Arabidopsis RepID=BLH2_ARATH 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Bel1 homeotic protein, putative 3.076e-24
Putative C-terminus
sp_v3.0_unigene62083 SustainPine v3.0 143
• AutoFact: Mitofusin 1 GTPase, involved in mitochondrila biogenesis (ISS) [Ostreococcus tauri] emb|CAL55609.1| Mitofusin 1 GTPase, involved in mitochondrila biogenesis (ISS) [Ostreococcus tauri] 1.0e-15
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene63237 SustainPine v3.0 199
• AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 2.0e-19
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: JmjC domain containing protein, expressed 4.621e-08
Internal
sp_v3.0_unigene64589 SustainPine v3.0 235
• AutoFact: RecName: Full=Endoribonuclease Dicer homolog 1; AltName: Full=Dicer-like protein 1; Short=OsDCL1 gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group] gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza 5.0e-08
• FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene66269 SustainPine v3.0 359
• AutoFact: Histone-arginine methyltransferase CARM1 n=4 Tax=Andropogoneae RepID=B6TUC1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein arginine N-methyltransferase 3.421e-17
N-terminus
sp_v3.0_unigene66994 SustainPine v3.0 389
• AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Laccase, putative 0.0
C-terminus
sp_v3.0_unigene67888 SustainPine v3.0 413
• AutoFact: AGAMOUS homolog (Fragment) n=2 Tax=Liquidambar RepID=Q9XHM3_LIQST 2.0e-15
• FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: AGAMOUS-like protein 3.794e-28
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain