Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cold acclimation

Term: GO:0009631  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene195 SustainPine v3.0 3806
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glycine-rich RNA-binding protein 2.597e-27
Complete
sp_v3.0_unigene1746 SustainPine v3.0 1416
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.378e-11
Complete
sp_v3.0_unigene2732 SustainPine v3.0 1569
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase complex component 2.737e-15
C-terminus
sp_v3.0_unigene4329 SustainPine v3.0 982
AutoFact: MYB transcription factor MYB185 [Glycine max] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.656e-22
N-terminus
sp_v3.0_unigene4432 SustainPine v3.0 452
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase complex component 8.499e-20
Internal
sp_v3.0_unigene4737 SustainPine v3.0 427
AutoFact: MYB domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ53_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Typical P-type R2R3 Myb protein 4.016e-11
N-terminus
sp_v3.0_unigene5040 SustainPine v3.0 912
AutoFact: DNA-binding transcription factor blind 1 n=1 Tax=Gossypium hirsutum RepID=E7D5Q3_GOSHI 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 1.382e-24
Internal
sp_v3.0_unigene5448 SustainPine v3.0 2679
AutoFact: mitogen-activated protein kinase kinase [Suaeda salsa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen-activated protein kinase kinase 1 2.77e-13
Complete
sp_v3.0_unigene6136 SustainPine v3.0 1799
AutoFact: Ca2+ antiporter/cation exchanger (Fragment) n=2 Tax=Populus trichocarpa RepID=B9GII2_POPTR 0.0
FL-Next: sp=Vacuolar cation/proton exchanger 1a; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Ca2+ antiporter/cation exchanger 1.204e-20
Complete
sp_v3.0_unigene6156 SustainPine v3.0 2512
AutoFact: H+/Ca2+ exchanger 2 n=1 Tax=Ipomoea nil RepID=Q9ZQT4_IPONI 0.0
FL-Next: sp=Vacuolar cation/proton exchanger 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Ca2+ antiporter/cation exchanger 1.322e-20
Complete
sp_v3.0_unigene7997 SustainPine v3.0 1238
AutoFact: MYB transcription factor n=1 Tax=Populus trichocarpa RepID=B9H191_POPTR 0.0
FL-Next: sp=Myb-related protein 308; Antirrhinum majus (Garden snapdragon). 0.0
Sma3: MYB transcription factor 2.788e-22
Complete
sp_v3.0_unigene8108 SustainPine v3.0 2102
AutoFact: MAP kinase n=1 Tax=Selaginella moellendorffii RepID=D8SYB3_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MAP kinase kinase 2.566e-28
Complete
sp_v3.0_unigene9322 SustainPine v3.0 2127
AutoFact: H+/Ca2+ exchanger 2 [Ipomoea nil] 0.0
FL-Next: sp=Vacuolar cation/proton exchanger 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Ca2+ antiporter/cation exchanger 1.407e-20
Complete
sp_v3.0_unigene10618 SustainPine v3.0 1714
AutoFact: myb domain protein 20 [Arabidopsis thaliana] gb|AAG51765.1|AC066691_5 myb-related transcription factor, putative; 17635-18559 [Arabidopsis thaliana] gb|AAS10035.1| MYB transcription factor [Arabidopsis thaliana] gb|ABI49451.1| At1g66230 [Arabidopsis thali 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB1; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 5.191e-40
Complete
sp_v3.0_unigene11398 SustainPine v3.0 1235
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB1 8.002e-11
Complete
sp_v3.0_unigene11585 SustainPine v3.0 971
AutoFact: Ca2+ antiporter/cation exchanger n=2 Tax=Populus trichocarpa RepID=B9IG90_POPTR 0.0
FL-Next: Isoform 2 of Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a 0.0
Sma3: Ca2+ antiporter/cation exchanger 1.13e-20
C-terminus
sp_v3.0_unigene11621 SustainPine v3.0 1249
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB1 1.038e-10
Complete
sp_v3.0_unigene12248 SustainPine v3.0 1563
AutoFact: putative transcriptional adaptor [Oryza sativa Japonica Group] gb|ABF98901.1| transcriptional adaptor, putative, expressed [Oryza sativa Japonica Group] gb|EEC76186.1| hypothetical protein OsI_13524 [Oryza sativa Indica Group] gb|EEE59936.1| hypothetical 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Histone acetyltransferase complex component 1.369e-19
N-terminus
sp_v3.0_unigene13369 SustainPine v3.0 1118
AutoFact: R2R3-MYB transcription factor MYB5 n=1 Tax=Picea glauca RepID=A5JYE9_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: MYB transcription factor 8.881e-28
Complete
sp_v3.0_unigene15676 SustainPine v3.0 404
AutoFact: R2R3-MYB transcription factor MYB11 n=1 Tax=Picea glauca RepID=A5JYF5_PICGL 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB11; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: MYB transcription factor 5.553e-32
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain