Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene183091 SustainPine v3.0 227
• AutoFact: transketolase [Nicotiana attenuata] 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TK 6.5e-23
Internal
sp_v3.0_unigene183370 SustainPine v3.0 523
• AutoFact: Ferritin n=1 Tax=Tegillarca granosa RepID=D3JCC5_TEGGR 0.0
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene183422 SustainPine v3.0 522
• AutoFact: Ferritin n=1 Tax=Sinonovacula constricta RepID=D2JIV0_SINCO 5.60519e-45
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene183617 SustainPine v3.0 626
• AutoFact: NADPH:protochlorophyllide oxidoreductase porA (Fragment) n=1 Tax=Pinus strobus RepID=O22599_PINST 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NADPH-protochlorophyllide oxidoreductase 2.013e-23
C-terminus
sp_v3.0_unigene184929 SustainPine v3.0 312
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene186087 SustainPine v3.0 179
• AutoFact: putative FKBP-type peptidyl-prolyl cis-trans isomerase 7 [Arabidopsis thaliana] sp|Q9LYR5.1|FKBP7_ARATH RecName: Full=Probable FKBP-type peptidyl-prolyl cis-trans isomerase 7, chloroplastic; Short=PPIase; AltName: Full=Rotamase; Flags: Precursor emb|CAB87 4.0e-21
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene186619 SustainPine v3.0 542
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blastocystis hominis RepID=D8M4H8_BLAHO 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene187639 SustainPine v3.0 570
• AutoFact: Allene oxide synthase n=1 Tax=Camellia sinensis RepID=C7BBB6_CAMSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Allene oxide synthase 0.0
Putative C-terminus
sp_v3.0_unigene187960 SustainPine v3.0 920
• AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 4.0e-25
• FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: 36.4 kDa proline-rich protein 1.494e-17
Complete
sp_v3.0_unigene188342 SustainPine v3.0 242
• AutoFact: Aaa-metalloprotease chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1FDU0_MICSR 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division protease ftsH homolog 8.829e-16
Internal
sp_v3.0_unigene188429 SustainPine v3.0 378
• AutoFact: Cyclophilin B n=1 Tax=Dictyostelium fasciculatum RepID=F4Q2H7_9MYCE 1.0e-37
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene188604 SustainPine v3.0 1022
• AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I reaction center subunit IV A 2.837e-12
Complete
sp_v3.0_unigene189122 SustainPine v3.0 585
• AutoFact: NADPH-protochlorophyllide-oxidoreductase n=6 Tax=Pinaceae RepID=Q41202_PINMU 0.0
• FL-Next: tr=NADPH-protochlorophyllide-oxidoreductase; Pinus mugo (Dwarf mountain pine). 0.0
• Sma3: NADPH-protochlorophyllide oxidoreductase 6.842e-23
Internal
sp_v3.0_unigene189421 SustainPine v3.0 708
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Putative Complete
sp_v3.0_unigene189568 SustainPine v3.0 868
• AutoFact: ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana] gb|AED90917.1| ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein [Arabidopsis thaliana] 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene189911 SustainPine v3.0 528
• AutoFact: Glutamine synthetase n=4 Tax=Hypocreales RepID=GLNA_FUSSH 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene190047 SustainPine v3.0 364
• AutoFact: Elongation factor Tu-2 n=1 Tax=Streptomyces ramocissimus RepID=EFTU2_STRRA 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor Tu 0.0
Putative C-terminus
sp_v3.0_unigene190103 SustainPine v3.0 438
• AutoFact: Transketolase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IAN1_CHLRE 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TK 4.692e-19
C-terminus
sp_v3.0_unigene190215 SustainPine v3.0 407
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Argopecten irradians RepID=A8QKJ4_AEQIR 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene190317 SustainPine v3.0 409
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Entamoeba RepID=B0ET56_ENTDI 9.99967e-42
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain