Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene161375 SustainPine v3.0 291
AutoFact: heme-binding-like protein [Arabidopsis thaliana] sp|Q9SR77.1|HBPL1_ARATH RecName: Full=Heme-binding-like protein At3g10130, chloroplastic; Flags: Precursor gb|AAF04411.1|AC010927_4 unknown protein [Arabidopsis thaliana] gb|AAW38980.1| At3g10130 [Arabidops 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene161697 SustainPine v3.0 319
AutoFact: Glutathione peroxidase n=1 Tax=Paramecium tetraurelia RepID=A0CYK6_PARTE 8.0e-22
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutathione peroxidase 0.0
N-terminus
sp_v3.0_unigene163885 SustainPine v3.0 222
AutoFact: putative inner membrane protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99855.1| ARTEMIS protein, chloroplast precursor, putative, expressed [Oryza sativa Japonica Group] 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inner membrane protein ALBINO3 9.358e-09
Internal
sp_v3.0_unigene165168 SustainPine v3.0 131
AutoFact: DnaJ homologue n=1 Tax=Pisum sativum RepID=P92424_PEA 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165396 SustainPine v3.0 154
AutoFact: Peptidyl-prolyl cis-trans isomerase n=3 Tax=Agaricomycetes RepID=B8PMM3_POSPM 5.0e-10
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene165423 SustainPine v3.0 402
AutoFact: Cytochrome P450 n=1 Tax=Panax notoginseng RepID=F4YF70_9APIA 9.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Allene oxide synthase 0.0
Internal
sp_v3.0_unigene166235 SustainPine v3.0 403
AutoFact: Ascorbate peroxidase n=1 Tax=Doritis pulcherrima x Phalaenopsis hybrid cultivar RepID=E4W4Z8_9ASPA 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ascorbate peroxidase 0.0
C-terminus
sp_v3.0_unigene166269 SustainPine v3.0 302
AutoFact: ATP-dependent Clp protease proteolytic subunit (Fragment) n=5 Tax=Xenopus RepID=B0BMC3_XENTR 4.0e-27
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent Clp protease proteolytic subunit 0.0
C-terminus
sp_v3.0_unigene166333 SustainPine v3.0 292
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene166395 SustainPine v3.0 298
AutoFact: putative plastid-lipid-associated protein 12 [Arabidopsis thaliana] sp|Q8LAP6.1|PAP12_ARATH RecName: Full=Probable plastid-lipid-associated protein 12, chloroplastic; AltName: Full=Fibrillin-12; Flags: Precursor gb|AAM65225.1| unknown [Arabidopsis thalian 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166589 SustainPine v3.0 489
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Leptosphaeria maculans RepID=E5A619_LEPMC 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene166668 SustainPine v3.0 509
AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PSI-E 2.4e-27
Complete
sp_v3.0_unigene166678 SustainPine v3.0 305
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Piriformospora indica RepID=C6KGV3_PIRIN 2.0e-23
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene166769 SustainPine v3.0 279
AutoFact: Photosystem I reaction center subunit III n=1 Tax=Vigna radiata var. radiata RepID=Q9XQB4_VIGRR 8.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Photosystem I reaction center subunit III, chloroplastic 2.793e-21
Internal
sp_v3.0_unigene167079 SustainPine v3.0 271
AutoFact: Signal recognition particle 43 kDa protein, chloroplastic n=2 Tax=Arabidopsis RepID=SR43C_ARATH 2.0e-25
FL-Next: sp=Signal recognition particle 43 kDa protein, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene167784 SustainPine v3.0 274
AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative n=1 Tax=Ricinus communis RepID=B9SYC0_RICCO 3.0e-14
FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 3, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cell division protease ftsH homolog 3, mitochondrial 1.649e-08
Misassembled
sp_v3.0_unigene167847 SustainPine v3.0 215
AutoFact: Transketolase-like protein n=9 Tax=core eudicotyledons RepID=Q9LZY8_ARATH 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TK 3.924e-23
Internal
sp_v3.0_unigene168118 SustainPine v3.0 234
AutoFact: Ethylene-dependent gravitropism-deficient and yellow-green-like 2 protein n=2 Tax=Arabidopsis RepID=Q9FFK3_ARATH 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene168253 SustainPine v3.0 174
AutoFact: cell division protein [Guillardia theta] sp|O78516.1|FTSH_GUITH RecName: Full=ATP-dependent zinc metalloprotease FtsH gb|AAC35738.1| hypothetical chloroplast RF25 [Guillardia theta] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division protease ftsH homolog 1.872e-14
Internal
sp_v3.0_unigene180171 SustainPine v3.0 441
AutoFact: Unassigned protein
Sma3: Cytochrome b6-f complex iron-sulfur subunit 7.675e-29
putative_coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain