Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene156739 SustainPine v3.0 383
• AutoFact: Major light-harvesting complex II protein m10 n=1 Tax=Chlamydomonas reinhardtii RepID=Q8S3U0_CHLRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.805e-21
Putative N-terminus
sp_v3.0_unigene157093 SustainPine v3.0 541
• AutoFact: Peptidyl-prolyl cis-trans isomerase cyp6 n=1 Tax=Rhizopus oryzae RepID=CYP6_RHIOR 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene157114 SustainPine v3.0 378
• AutoFact: Ferritin n=5 Tax=Hydra RepID=A0S5U1_HYDVU 1.0e-36
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
Internal
sp_v3.0_unigene157212 SustainPine v3.0 379
• AutoFact: Photosystem I reaction center subunit XI n=1 Tax=Chlamydomonas reinhardtii RepID=A8IL32_CHLRE 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem I reaction center subunit XI 1.095e-13
C-terminus
sp_v3.0_unigene157302 SustainPine v3.0 242
• AutoFact: Light-harvesting protein of photosystem I n=4 Tax=Chlamydomonadales RepID=D8UIW8_VOLCA 2.0e-16
• FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: LHCP 7.021e-25
C-terminus
sp_v3.0_unigene157401 SustainPine v3.0 388
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Onchocercidae RepID=E1FRU8_LOALO 1.0e-35
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene157693 SustainPine v3.0 456
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thalassiosira pseudonana RepID=B8C7H9_THAPS 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene157720 SustainPine v3.0 422
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Threonine endopeptidase 4.584e-08
C-terminus
sp_v3.0_unigene157761 SustainPine v3.0 243
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bigelowiella natans RepID=Q5YER7_BIGNA 2.0e-20
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene157985 SustainPine v3.0 351
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Trichomonas vaginalis RepID=A2EC21_TRIVA 3.0e-39
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene158245 SustainPine v3.0 346
• AutoFact: 10 kDa photosystem II polypeptide (Fragment) n=2 Tax=Chlamydomonadales RepID=A8HXG5_CHLRE 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II 10 kDa polypeptide, chloroplastic 9.315e-12
Putative N-terminus
sp_v3.0_unigene158349 SustainPine v3.0 502
• AutoFact: Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Dictyostelium discoideum RepID=PPIB_DICDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene158504 SustainPine v3.0 353
• AutoFact: AAA ATPase domain-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3BKR2_POLPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 1.285e-11
Internal
sp_v3.0_unigene158614 SustainPine v3.0 289
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Andropogoneae RepID=C5X6U8_SORBI 4.0e-24
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene158719 SustainPine v3.0 330
• AutoFact: ATP synthase delta chain, chloroplastic n=4 Tax=Chlamydomonadales RepID=ATPD_CHLRE 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP synthase 7.588e-22
C-terminus
sp_v3.0_unigene158750 SustainPine v3.0 432
• AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Vaucheria litorea RepID=Q9ATC5_VAULI 7.0e-28
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
C-terminus
sp_v3.0_unigene158765 SustainPine v3.0 428
• AutoFact: Peptidyl-prolyl cis-trans isomerase CYP20-1 n=2 Tax=Arabidopsis RepID=CP20A_ARATH 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene160626 SustainPine v3.0 512
• AutoFact: Glutamine synthetase n=4 Tax=Hypocreales RepID=GLNA_FUSSH 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene160938 SustainPine v3.0 387
• AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 1.0e-36
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 9.51103e-41
Internal
sp_v3.0_unigene161350 SustainPine v3.0 373
• AutoFact: Cytochrome c oxidase subunit 6b n=2 Tax=Oryza sativa RepID=Q9SXV0_ORYSJ 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome c oxidase subunit 6b 5.012e-13
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain