Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene145096 SustainPine v3.0 455
• AutoFact: uridylyltransferase-related protein [Arabidopsis thaliana] gb|AAF99845.1|AC051629_12 Unknown protein [Arabidopsis thaliana] gb|AAK62433.1|AF386988_1 Unknown protein [Arabidopsis thaliana] gb|AAP13425.1| At1g16880 [Arabidopsis thaliana] gb|AEE29513.1| urid 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Amino acid binding protein, putative 8.438e-08
C-terminus
sp_v3.0_unigene145187 SustainPine v3.0 585
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
N-terminus
sp_v3.0_unigene145356 SustainPine v3.0 268
• AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 2.0e-38
• FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
Internal
sp_v3.0_unigene145360 SustainPine v3.0 389
• AutoFact: Glutathione peroxidase-like protein (Fragment) n=10 Tax=Picea sitchensis RepID=E0Z6W2_PICSI 3.0e-38
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
C-terminus
sp_v3.0_unigene145642 SustainPine v3.0 388
• AutoFact: Cytochrome b6-f complex iron-sulfur subunit n=2 Tax=Picea sitchensis RepID=A9NLM7_PICSI 2.0e-09
• FL-Next: sp=Cytochrome b6-f complex iron-sulfur subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome b6-f complex iron-sulfur subunit 8.40779e-44
N-terminus
sp_v3.0_unigene145690 SustainPine v3.0 243
• AutoFact: Ferritin (Fragment) n=3 Tax=Pseudotsuga RepID=C6F952_PSEMZ 2.0e-18
• FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ferritin 0.0
C-terminus
sp_v3.0_unigene145916 SustainPine v3.0 492
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: Ribulose bisphosphate carboxylase small chain 0.0
Complete
sp_v3.0_unigene146030 SustainPine v3.0 590
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Cryptomeria japonica RepID=Q1XG52_CRYJA 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene146065 SustainPine v3.0 395
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-21
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 2.157e-19
Misassembled
sp_v3.0_unigene146159 SustainPine v3.0 664
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gerbera hybrid cultivar RepID=A8CYN7_GERHY 2.0e-26
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene146175 SustainPine v3.0 428
• AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 3.183e-19
N-terminus
sp_v3.0_unigene146225 SustainPine v3.0 539
• AutoFact: Chloroplast photosystem II light-inducible protein n=1 Tax=Pachysandra terminalis RepID=A1XX43_9MAGN 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Photosystem II 10 kDa polypeptide, chloroplastic 6.857e-19
C-terminus
sp_v3.0_unigene146252 SustainPine v3.0 388
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 5.239e-17
N-terminus
sp_v3.0_unigene146255 SustainPine v3.0 290
• AutoFact: Type I chlorophyll a/b-binding protein b (Fragment) n=10 Tax=core eudicotyledons RepID=Q9AVF0_AMATR 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.489e-16
N-terminus
sp_v3.0_unigene146256 SustainPine v3.0 540
• AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.041e-28
N-terminus
sp_v3.0_unigene146267 SustainPine v3.0 349
• AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-19
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 2.742e-16
N-terminus
sp_v3.0_unigene146273 SustainPine v3.0 658
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=3 Tax=Pinaceae RepID=A5HIY2_PINTA 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete
sp_v3.0_unigene146276 SustainPine v3.0 627
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 1.021e-26
Putative Complete
sp_v3.0_unigene146304 SustainPine v3.0 764
• AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: LHCP 2.755e-29
Complete
sp_v3.0_unigene146308 SustainPine v3.0 507
• AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 7.9874e-44
• FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: LHCP 1.342e-26
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain