Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene110369 SustainPine v3.0 179
• AutoFact: H/ACA ribonucleoprotein complex subunit 1-like protein 1 n=5 Tax=Andropogoneae RepID=B6TFJ5_MAIZE 1.0e-13
• FL-Next: sp=Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: H/ACA ribonucleoprotein complex subunit 1-like protein 1 6.229e-09
Internal
sp_v3.0_unigene111024 SustainPine v3.0 264
• AutoFact: Putative 9-cis-epoxycarotenoid dioxygenase n=9 Tax=Cupressaceae RepID=Q0EEH1_TAXDI 2.0e-27
• FL-Next: tr=Putative 9-cis-epoxycarotenoid dioxygenase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: 9-cis-epoxycarotenoid dioxygenase 5.975e-40
Internal
sp_v3.0_unigene111670 SustainPine v3.0 168
• AutoFact: DnaJ homologue [Pisum sativum] 9.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperone protein DNAj, putative 9.461e-10
Internal
sp_v3.0_unigene115495 SustainPine v3.0 572
• AutoFact: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic n=6 Tax=Poaceae RepID=FTSH2_ORYSJ 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative zinc dependent protease 2.532e-08
Putative N-terminus
sp_v3.0_unigene116199 SustainPine v3.0 505
• AutoFact: Lipoxygenase n=1 Tax=Picea sitchensis RepID=B8LLK5_PICSI 0.0
• FL-Next: sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lipoxygenase 0.0
Internal
sp_v3.0_unigene116374 SustainPine v3.0 414
• AutoFact: 30S ribosomal protein 3, chloroplastic n=2 Tax=Hordeum vulgare RepID=RRP3_HORVU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PSRP-3 1.55e-17
C-terminus
sp_v3.0_unigene119809 SustainPine v3.0 352
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=2 Tax=Entamoeba RepID=B0ET56_ENTDI 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative N-terminus
sp_v3.0_unigene119922 SustainPine v3.0 388
• AutoFact: Glutamine synthetase n=2 Tax=Tuber RepID=GLNA_TUBBO 0.0
• FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene120281 SustainPine v3.0 320
• AutoFact: Chloroplast light-harvesting chlorophyll-a/b binding protein n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y3_9CHLO 5.0e-19
• FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Sma3: LHCP 0.0
N-terminus
sp_v3.0_unigene120478 SustainPine v3.0 495
• AutoFact: Glutathione peroxidase n=1 Tax=Taiwanofungus camphoratus RepID=B8K1J5_TAICA 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Putative Complete
sp_v3.0_unigene121659 SustainPine v3.0 257
• AutoFact: Putative zinc dependent protease n=1 Tax=Trifolium pratense RepID=Q2PEX6_TRIPR 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative zinc dependent protease 2.594e-08
Internal
sp_v3.0_unigene121661 SustainPine v3.0 844
• AutoFact: Chaperone protein dnaJ n=3 Tax=Chroococcales RepID=DNAJ_CYAA5 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene123507 SustainPine v3.0 303
• AutoFact: putative potential copper-transporting ATPase [Oryza sativa Japonica Group] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: p-type ATPase superfamily 4.015e-11
Internal
sp_v3.0_unigene124701 SustainPine v3.0 817
• AutoFact: Geranylgeranyl reductase n=2 Tax=Euphorbiaceae RepID=B7X936_HEVBR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl reductase 5.558e-24
C-terminus
sp_v3.0_unigene125076 SustainPine v3.0 286
• AutoFact: putative CLC-e chloride channel protein [Arabidopsis thaliana] 2.0e-20
• FL-Next: sp=Chloride channel protein CLC-e; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene125229 SustainPine v3.0 375
• AutoFact: putative cell division control protein [Arabidopsis thaliana] 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cell division cycle protein 48 homolog 2.473e-10
Internal
sp_v3.0_unigene126684 SustainPine v3.0 801
• AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
• FL-Next: sp=Probable phospholipid hydroperoxide glutathione peroxidase; crystallinum). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene126688 SustainPine v3.0 791
• AutoFact: Nucleic acid-binding protein n=1 Tax=Zea mays RepID=Q41834_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribonucleoprotein 1.048e-16
C-terminus
sp_v3.0_unigene126738 SustainPine v3.0 653
• AutoFact: Glutathione peroxidase (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z6F2_PICSI 0.0
• FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glutathione peroxidase 0.0
Complete
sp_v3.0_unigene126835 SustainPine v3.0 661
• AutoFact: Photosystem I reaction center subunit IV A, chloroplast n=1 Tax=Ricinus communis RepID=B9S592_RICCO 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PSI-E 2.4e-27
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain